Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 RNU6-178P-201ENST00000384631 104 ntBASIC4.08□□□□□ -1.76
PDX1P52945 MIR513B-201ENST00000385136 84 ntBASIC4.08□□□□□ -1.76
PDX1P52945 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 AL121834.1-202ENST00000404494 277 ntBASIC4.08□□□□□ -1.76
PDX1P52945 VN1R8P-201ENST00000407739 893 ntBASIC4.08□□□□□ -1.76
PDX1P52945 MIR1911-201ENST00000410783 80 ntBASIC4.08□□□□□ -1.76
PDX1P52945 RNU6-272P-201ENST00000411028 104 ntBASIC4.08□□□□□ -1.76
PDX1P52945 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 Z75741.2-201ENST00000417272 1167 ntBASIC4.08□□□□□ -1.76
PDX1P52945 UBTFL3-201ENST00000418934 1024 ntBASIC4.08□□□□□ -1.76
PDX1P52945 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.08□□□□□ -1.76
PDX1P52945 AL031736.2-201ENST00000426573 787 ntBASIC4.08□□□□□ -1.76
PDX1P52945 HMGB3P5-201ENST00000428894 612 ntBASIC4.08□□□□□ -1.76
PDX1P52945 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 AC004865.1-201ENST00000442276 1003 ntBASIC4.08□□□□□ -1.76
PDX1P52945 PTMAP3-201ENST00000447474 330 ntBASIC4.08□□□□□ -1.76
PDX1P52945 COX6CP18-201ENST00000448769 222 ntBASIC4.08□□□□□ -1.76
PDX1P52945 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 AC005410.1-202ENST00000460347 485 ntBASIC4.08□□□□□ -1.76
PDX1P52945 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 UBTFL6-201ENST00000477929 1024 ntBASIC4.08□□□□□ -1.76
PDX1P52945 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.08□□□□□ -1.76
PDX1P52945 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 AC109471.1-201ENST00000511631 612 ntBASIC4.08□□□□□ -1.76
PDX1P52945 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 MTND4LP31-201ENST00000514859 294 ntBASIC4.08□□□□□ -1.76
PDX1P52945 RNU6-202P-201ENST00000515998 96 ntBASIC4.08□□□□□ -1.76
PDX1P52945 RNU6-311P-201ENST00000516224 102 ntBASIC4.08□□□□□ -1.76
PDX1P52945 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
PDX1P52945 Y_RNA.717-201ENST00000517106 92 ntBASIC4.08□□□□□ -1.76
PDX1P52945 EEF1A1P37-201ENST00000522748 715 ntBASIC4.08□□□□□ -1.76
PDX1P52945 SMARCE1P4-201ENST00000523647 241 ntBASIC4.08□□□□□ -1.76
PDX1P52945 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.08□□□□□ -1.76
PDX1P52945 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.08□□□□□ -1.76
PDX1P52945 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.08□□□□□ -1.76
PDX1P52945 AC053481.3-201ENST00000577881 843 ntBASIC4.08□□□□□ -1.76
PDX1P52945 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 AC008147.4-201ENST00000617570 1204 ntBASIC4.08□□□□□ -1.76
PDX1P52945 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 AP000770.2-201ENST00000623694 100 ntBASIC4.08□□□□□ -1.76
PDX1P52945 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 AC087821.2-201ENST00000637086 450 ntBASIC4.08□□□□□ -1.76
PDX1P52945 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 MFSD8-245ENST00000641743 948 ntBASIC4.08□□□□□ -1.76
PDX1P52945 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 PHKBP1-201ENST00000450951 1951 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC009229.4-201ENST00000623854 1947 ntBASIC4.07□□□□□ -1.76
PDX1P52945 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDX1P52945 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDX1P52945 MTND4P8-201ENST00000514997 1362 ntBASIC4.07□□□□□ -1.76
PDX1P52945 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDX1P52945 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDX1P52945 SNORA51.12-201ENST00000384448 134 ntBASIC4.07□□□□□ -1.76
PDX1P52945 RNU6-1151P-201ENST00000384684 107 ntBASIC4.07□□□□□ -1.76
PDX1P52945 MIR670-201ENST00000390142 98 ntBASIC4.07□□□□□ -1.76
PDX1P52945 RNU11-4P-201ENST00000391149 133 ntBASIC4.07□□□□□ -1.76
PDX1P52945 ENSAP1-201ENST00000392855 326 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 GSTA8P-201ENST00000404253 637 ntBASIC4.07□□□□□ -1.76
PDX1P52945 PRRC2CP1-201ENST00000404428 159 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AL136310.1-201ENST00000404926 654 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 OR2X1P-201ENST00000421144 687 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AL513175.2-201ENST00000422071 443 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AC073335.1-201ENST00000427776 363 ntBASIC4.07□□□□□ -1.76
PDX1P52945 SKP1P3-201ENST00000429280 487 ntBASIC4.07□□□□□ -1.76
PDX1P52945 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.07□□□□□ -1.76
PDX1P52945 YWHAZP8-201ENST00000436935 731 ntBASIC4.07□□□□□ -1.76
PDX1P52945 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 VN1R25P-201ENST00000443385 738 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.07□□□□□ -1.76
PDX1P52945 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 RPL23AP15-201ENST00000450202 459 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 EIF4A1P11-201ENST00000451239 222 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms