Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MRE11P49959 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.61□□□□□ -1.51
MRE11P49959 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 Y_RNA.41-201ENST00000362646 102 ntBASIC5.61□□□□□ -1.51
MRE11P49959 RNU6-452P-201ENST00000384406 107 ntBASIC5.61□□□□□ -1.51
MRE11P49959 MIR921-201ENST00000401133 56 ntBASIC5.61□□□□□ -1.51
MRE11P49959 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MRE11P49959 Z99497.1-201ENST00000421282 135 ntBASIC5.61□□□□□ -1.51
MRE11P49959 OR2B8P-201ENST00000432841 938 ntBASIC5.61□□□□□ -1.51
MRE11P49959 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
MRE11P49959 TMX2P1-201ENST00000436507 708 ntBASIC5.61□□□□□ -1.51
MRE11P49959 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 MTND1P30-201ENST00000441241 901 ntBASIC5.61□□□□□ -1.51
MRE11P49959 RPS26P30-201ENST00000443431 335 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AL137845.2-201ENST00000444292 988 ntBASIC5.61□□□□□ -1.51
MRE11P49959 MTCO2P25-201ENST00000447065 681 ntBASIC5.61□□□□□ -1.51
MRE11P49959 HMGB1P16-201ENST00000447155 540 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.61□□□□□ -1.51
MRE11P49959 HMGB1P4-201ENST00000455362 567 ntBASIC5.61□□□□□ -1.51
MRE11P49959 CFTRP1-201ENST00000456646 183 ntBASIC5.61□□□□□ -1.51
MRE11P49959 RPS26P28-201ENST00000470806 348 ntBASIC5.61□□□□□ -1.51
MRE11P49959 RPL23AP65-201ENST00000475608 468 ntBASIC5.61□□□□□ -1.51
MRE11P49959 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
MRE11P49959 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.61□□□□□ -1.51
MRE11P49959 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 OR7H2P-201ENST00000513483 306 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.61□□□□□ -1.51
MRE11P49959 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.61□□□□□ -1.51
MRE11P49959 CCNG2P1-201ENST00000549521 1000 ntBASIC5.61□□□□□ -1.51
MRE11P49959 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.61□□□□□ -1.51
MRE11P49959 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 AC087481.2-201ENST00000565492 330 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.61□□□□□ -1.51
MRE11P49959 AC012414.6-201ENST00000568241 401 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.61□□□□□ -1.51
MRE11P49959 BNIP3P30-201ENST00000601184 574 ntBASIC5.61□□□□□ -1.51
MRE11P49959 BNIP3P4-201ENST00000604946 565 ntBASIC5.61□□□□□ -1.51
MRE11P49959 AC019226.1-201ENST00000625666 515 ntBASIC5.61□□□□□ -1.51
MRE11P49959 MIR6830-201ENST00000636015 70 ntBASIC5.61□□□□□ -1.51
MRE11P49959 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MRE11P49959 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MRE11P49959 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.61□□□□□ -1.51
MRE11P49959 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MRE11P49959 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
MRE11P49959 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 MIR448-201ENST00000362131 111 ntBASIC5.6□□□□□ -1.51
MRE11P49959 ATP5F1P4-201ENST00000397288 746 ntBASIC5.6□□□□□ -1.51
MRE11P49959 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 RAP1BP3-201ENST00000407180 549 ntBASIC5.6□□□□□ -1.51
MRE11P49959 TPMTP3-201ENST00000411928 735 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
MRE11P49959 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 MRPS10P2-201ENST00000431226 381 ntBASIC5.6□□□□□ -1.51
MRE11P49959 NEK4P1-201ENST00000433383 879 ntBASIC5.6□□□□□ -1.51
MRE11P49959 USP9YP22-201ENST00000438971 294 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC069285.2-201ENST00000440210 275 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AL591363.1-201ENST00000450091 483 ntBASIC5.6□□□□□ -1.51
MRE11P49959 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 snoU13.1-201ENST00000459157 104 ntBASIC5.6□□□□□ -1.51
MRE11P49959 RN7SL443P-201ENST00000464331 290 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC006967.1-201ENST00000467608 589 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MRE11P49959 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.6□□□□□ -1.51
MRE11P49959 RN7SL809P-201ENST00000482040 297 ntBASIC5.6□□□□□ -1.51
MRE11P49959 RPL9P33-201ENST00000484311 566 ntBASIC5.6□□□□□ -1.51
MRE11P49959 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 RNA5SP373-201ENST00000517271 95 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC012400.1-201ENST00000518452 381 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.6□□□□□ -1.51
MRE11P49959 AC005832.3-201ENST00000537929 631 ntBASIC5.6□□□□□ -1.51
MRE11P49959 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.6□□□□□ -1.51
MRE11P49959 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.6□□□□□ -1.51
MRE11P49959 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.6□□□□□ -1.51
MRE11P49959 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 AL357078.3-201ENST00000607528 618 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 AC109347.2-201ENST00000610220 349 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC138749.5-201ENST00000611461 208 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AL121873.1-201ENST00000616013 524 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC124312.6-202ENST00000623624 418 ntBASIC5.6□□□□□ -1.51
MRE11P49959 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 AC099654.13-201ENST00000639774 207 ntBASIC5.6□□□□□ -1.51
MRE11P49959 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms