Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD4P46934 PPIAP17-201ENST00000438507 471 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC239367.2-201ENST00000447309 705 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC010655.1-201ENST00000449336 292 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 RNU7-27P-201ENST00000459281 62 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD4P46934 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 RN7SKP13-201ENST00000515933 244 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 RNU5A-7P-201ENST00000515979 116 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD4P46934 AP003355.1-201ENST00000518956 587 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD4P46934 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 AL139022.2-201ENST00000606934 443 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC011374.2-201ENST00000607135 526 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AL391834.1-201ENST00000609609 560 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AP005229.2-201ENST00000609980 697 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD4P46934 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 MTND4P9-201ENST00000507819 1346 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD4P46934 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NEDD4P46934 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 AC012020.1-201ENST00000624541 1728 ntBASIC4.25□□□□□ -1.73
NEDD4P46934 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 RNA5SP42-201ENST00000364278 115 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 RNU6-1257P-201ENST00000384625 110 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AL355143.1-201ENST00000407101 841 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AC069282.1-201ENST00000411911 526 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 MTCO3P4-201ENST00000419236 787 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 RPS26P47-201ENST00000427219 348 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AC005189.1-201ENST00000431286 310 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AL096829.2-201ENST00000446582 742 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 GXYLT1P1-201ENST00000446657 490 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 AC073387.1-201ENST00000453261 709 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 DNAJC19P1-201ENST00000455312 319 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 RPL7P48-201ENST00000461513 746 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 MTATP6P9-201ENST00000515039 680 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 RN7SKP18-201ENST00000516005 275 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD4P46934 HMGB1P23-201ENST00000518743 568 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.24□□□□□ -1.73
NEDD4P46934 AP006245.1-201ENST00000522549 120 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD4P46934 AL121766.1-201ENST00000547436 487 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 MIR4429-201ENST00000580105 73 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 AC020914.6-201ENST00000594327 272 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 AC245100.7-201ENST00000609678 442 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AL356121.2-201ENST00000624715 780 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD4P46934 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.24□□□□□ -1.73
NEDD4P46934 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NEDD4P46934 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.24□□□□□ -1.73
NEDD4P46934 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NEDD4P46934 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NEDD4P46934 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD4P46934 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 METTL21EP-201ENST00000298105 713 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 SNORD56.4-201ENST00000363883 71 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NEDD4P46934 AL391417.1-201ENST00000404100 426 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD4P46934 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 LINC01347-201ENST00000417964 355 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AC114814.2-201ENST00000419195 485 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD4P46934 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD4P46934 AC044797.1-201ENST00000445744 679 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 AC084357.1-201ENST00000473404 255 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AC106707.2-201ENST00000484182 374 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms