Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 MIR192-201ENST00000384915 110 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 OR6C69P-201ENST00000394268 893 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 FCF1P9-201ENST00000412546 282 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 BX510359.2-201ENST00000417920 305 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 AL953862.1-201ENST00000423016 168 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 FABP7P1-201ENST00000424004 391 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 OR2B8P-201ENST00000432841 938 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 BMS1P19-201ENST00000433925 393 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 MTATP6P13-201ENST00000438531 667 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.95□□□□□ -1.62
SLC6A4P31645 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 AL831737.1-201ENST00000441288 271 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 FHP1-201ENST00000442741 703 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 SNRPFP4-201ENST00000456366 242 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 RPS29P33-201ENST00000456717 146 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 RPS15AP1-201ENST00000457423 391 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 ARPC3P2-201ENST00000457786 533 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 RPL7AP10-201ENST00000481016 791 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AC013828.1-201ENST00000481845 158 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AC011825.1-201ENST00000484967 388 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 PRELID3BP7-201ENST00000503606 469 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.95□□□□□ -1.62
SLC6A4P31645 snoU109.6-201ENST00000516831 118 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 Y_RNA.719-201ENST00000517156 106 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 DEFB131D-201ENST00000526803 184 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 BNIP3P1-201ENST00000547295 580 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 PSMB7P1-201ENST00000556349 514 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC6A4P31645 KPNA2P3-201ENST00000584190 848 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 RN7SL52P-201ENST00000584271 284 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 AC083760.1-201ENST00000589621 670 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 uc_338.18-201ENST00000615451 175 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 U6atac.1-201ENST00000616025 117 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 RN7SL722P-201ENST00000617780 284 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 RN7SL565P-201ENST00000618246 284 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC6A4P31645 AC135352.1-201ENST00000506173 1418 ntBASIC4.95□□□□□ -1.62
SLC6A4P31645 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC6A4P31645 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC6A4P31645 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC6A4P31645 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 AC009313.2-201ENST00000417893 1941 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 AL590240.1-201ENST00000334118 313 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 RNU5F-7P-201ENST00000363696 115 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 Y_RNA.359-201ENST00000365498 102 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 RNU6-444P-201ENST00000383988 108 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 SNORA75-201ENST00000384158 137 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 RPL17P12-201ENST00000413391 526 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 AC007738.1-201ENST00000413892 348 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 AL590139.1-201ENST00000416267 400 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 AC083875.1-201ENST00000419509 405 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 RPL21P32-201ENST00000419877 477 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC6A4P31645 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC6A4P31645 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC6A4P31645 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC6A4P31645 AC012512.1-201ENST00000446594 718 ntBASIC4.94□□□□□ -1.62
SLC6A4P31645 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms