Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CASQ1P31415 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CASQ1P31415 GTF2H2B-203ENST00000508065 1432 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC139713.2-214ENST00000642059 1811 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
CASQ1P31415 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CASQ1P31415 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CASQ1P31415 MIR550A3-201ENST00000390735 95 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 HMGB3P18-201ENST00000406327 590 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 GTF2IP23-201ENST00000423746 351 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 COX6CP15-201ENST00000426313 211 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AL606490.7-201ENST00000433136 191 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 Z77249.1-201ENST00000444622 1175 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CASQ1P31415 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.89□□□□□ -1.79
CASQ1P31415 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.89□□□□□ -1.79
CASQ1P31415 NECAP1P2-201ENST00000455668 727 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.89□□□□□ -1.79
CASQ1P31415 RPS4XP2-201ENST00000458402 793 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 snoU13.7-201ENST00000459220 104 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC110792.1-201ENST00000491826 472 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AL139099.1-201ENST00000497398 403 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.89□□□□□ -1.79
CASQ1P31415 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.89□□□□□ -1.79
CASQ1P31415 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.89□□□□□ -1.79
CASQ1P31415 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CASQ1P31415 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.89□□□□□ -1.79
CASQ1P31415 AC023161.2-201ENST00000551218 780 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.89□□□□□ -1.79
CASQ1P31415 OR7E18P-201ENST00000592589 702 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AL133393.1-201ENST00000603277 287 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC138473.1-201ENST00000605717 526 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.89□□□□□ -1.79
CASQ1P31415 AL359535.1-201ENST00000612100 1087 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AL390240.1-201ENST00000612950 384 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 MIR6729-201ENST00000618194 65 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AC022149.2-201ENST00000621061 203 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 AF001550.2-201ENST00000636643 217 ntBASIC3.89□□□□□ -1.79
CASQ1P31415 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.89□□□□□ -1.79
CASQ1P31415 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.89□□□□□ -1.79
CASQ1P31415 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CASQ1P31415 SAR1AP2-201ENST00000392696 594 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AL133270.1-201ENST00000402635 279 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AL354719.1-201ENST00000406535 843 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 MIR1250-201ENST00000408098 113 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC068533.1-201ENST00000418542 415 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.88□□□□□ -1.79
CASQ1P31415 MTCYBP24-201ENST00000420387 1106 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AL645931.1-201ENST00000439737 410 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 RPL7P59-201ENST00000447700 943 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.88□□□□□ -1.79
CASQ1P31415 FABP5P12-201ENST00000515543 389 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 RNU2-27P-201ENST00000516185 142 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.88□□□□□ -1.79
CASQ1P31415 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.88□□□□□ -1.79
CASQ1P31415 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.88□□□□□ -1.79
CASQ1P31415 POLR2KP1-201ENST00000553226 168 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.88□□□□□ -1.79
CASQ1P31415 MIR4310-201ENST00000582950 57 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC008507.1-201ENST00000587506 734 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.88□□□□□ -1.79
CASQ1P31415 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 AC100827.5-201ENST00000615883 426 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 AL121890.3-201ENST00000618494 516 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AF117829.1-206ENST00000621883 3802 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AL357559.1-201ENST00000622228 274 ntBASIC3.88□□□□□ -1.79
CASQ1P31415 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.88□□□□□ -1.79
CASQ1P31415 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.88□□□□□ -1.79
CASQ1P31415 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CASQ1P31415 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CASQ1P31415 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.87□□□□□ -1.79
CASQ1P31415 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASQ1P31415 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASQ1P31415 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASQ1P31415 RNU6-670P-201ENST00000364312 104 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 RNVU1-6-201ENST00000364688 164 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 RNU6-1181P-201ENST00000384191 106 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.87□□□□□ -1.79
CASQ1P31415 MTND4P22-201ENST00000413116 1169 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASQ1P31415 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.87□□□□□ -1.79
CASQ1P31415 AC005517.2-201ENST00000424673 553 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASQ1P31415 GOT2P5-201ENST00000433995 546 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 AC006466.1-201ENST00000438721 289 ntBASIC3.87□□□□□ -1.79
CASQ1P31415 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.87□□□□□ -1.79
CASQ1P31415 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms