Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL445435.1-201ENST00000604232 665 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC8P31273 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC8P31273 MIR4509-1-201ENST00000618224 94 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 FP236240.3-201ENST00000623061 327 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AL109659.3-201ENST00000624985 950 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC8P31273 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC8P31273 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 AC010300.1-201ENST00000600671 5134 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 U8.11-201ENST00000384699 133 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 U8.12-201ENST00000384701 133 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 SNORD65C-201ENST00000390962 71 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 RAB9AP3-201ENST00000412737 573 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 AL450992.3-201ENST00000413192 568 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 PRELID3BP10-201ENST00000431957 584 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 TPTE2P3-201ENST00000441562 1189 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 AC005002.1-201ENST00000447458 540 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 RAB9AP1-201ENST00000449393 573 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 RPL23AP15-201ENST00000450202 459 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC8P31273 U8.18-201ENST00000459285 133 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC8P31273 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC008694.2-201ENST00000517591 306 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC010376.1-201ENST00000522101 334 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 CYCSP30-201ENST00000546447 172 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXC8P31273 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 CYP2C60P-201ENST00000566088 139 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 AC025627.2-201ENST00000576220 160 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 RN7SL622P-201ENST00000585292 275 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC8P31273 MIR7702-201ENST00000621931 59 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.44□□□□□ -1.7
HOXC8P31273 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC8P31273 MIR6715B-201ENST00000637172 77 ntBASIC4.44□□□□□ -1.7
HOXC8P31273 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXC8P31273 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC8P31273 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HOXC8P31273 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC8P31273 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC8P31273 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC8P31273 AL139811.1-201ENST00000424779 2299 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC8P31273 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC8P31273 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC8P31273 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC8P31273 RNU1-15P-201ENST00000353977 144 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 RNU5E-10P-201ENST00000363506 118 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 PTP4A1P7-201ENST00000423476 514 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 AC073335.1-201ENST00000427776 363 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC8P31273 MTND1P33-201ENST00000446251 917 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 AL929288.2-201ENST00000446368 407 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC8P31273 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC8P31273 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 RPL5P30-201ENST00000465511 891 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 AL139099.1-201ENST00000497398 403 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 AC008427.1-201ENST00000503102 655 ntBASIC4.43□□□□□ -1.7
HOXC8P31273 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC8P31273 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC8P31273 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms