Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNA5SP130-201ENST00000364431 114 ntBASIC3.72□□□□□ -1.81
SHC1P29353 SNORD116-12-201ENST00000384468 92 ntBASIC3.72□□□□□ -1.81
SHC1P29353 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHC1P29353 SNORD65C-201ENST00000390962 71 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC119751.3-201ENST00000399720 670 ntBASIC3.72□□□□□ -1.81
SHC1P29353 RPL7P27-201ENST00000403775 720 ntBASIC3.72□□□□□ -1.81
SHC1P29353 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 RNA5SP317-201ENST00000410176 116 ntBASIC3.72□□□□□ -1.81
SHC1P29353 RNA5SP311-201ENST00000411290 116 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 MTND4P3-201ENST00000417829 541 ntBASIC3.72□□□□□ -1.81
SHC1P29353 RPS3AP37-201ENST00000419176 745 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 AL513175.2-201ENST00000422071 443 ntBASIC3.72□□□□□ -1.81
SHC1P29353 VDAC1P6-201ENST00000430062 855 ntBASIC3.72□□□□□ -1.81
SHC1P29353 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 PTGES3P1-201ENST00000439531 483 ntBASIC3.72□□□□□ -1.81
SHC1P29353 HSFY3P-201ENST00000444242 1191 ntBASIC3.72□□□□□ -1.81
SHC1P29353 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 AL589880.1-201ENST00000448271 287 ntBASIC3.72□□□□□ -1.81
SHC1P29353 OR51B8P-201ENST00000449892 769 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHC1P29353 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AC105313.1-201ENST00000509121 353 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 RNA5SP315-201ENST00000516340 116 ntBASIC3.72□□□□□ -1.81
SHC1P29353 RNA5SP312-201ENST00000517068 116 ntBASIC3.72□□□□□ -1.81
SHC1P29353 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 AC104417.1-201ENST00000523974 751 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 LRRC6P1-201ENST00000532188 885 ntBASIC3.72□□□□□ -1.81
SHC1P29353 MTCO2P15-201ENST00000532655 656 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC007834.2-201ENST00000536310 343 ntBASIC3.72□□□□□ -1.81
SHC1P29353 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
SHC1P29353 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC011611.5-201ENST00000552477 578 ntBASIC3.72□□□□□ -1.81
SHC1P29353 DUXAP6-201ENST00000553858 601 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.72□□□□□ -1.81
SHC1P29353 NPM1P47-201ENST00000560843 856 ntBASIC3.72□□□□□ -1.81
SHC1P29353 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.72□□□□□ -1.81
SHC1P29353 AC061975.8-201ENST00000587058 721 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 AC025946.2-201ENST00000603398 234 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AP004607.9-201ENST00000618202 316 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AL121895.2-201ENST00000619558 447 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC013470.4-201ENST00000619978 986 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC017037.3-201ENST00000625016 472 ntBASIC3.72□□□□□ -1.81
SHC1P29353 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHC1P29353 AP003399.1-201ENST00000637534 361 ntBASIC3.72□□□□□ -1.81
SHC1P29353 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 AC027287.1-201ENST00000553115 1453 ntBASIC3.72□□□□□ -1.81
SHC1P29353 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHC1P29353 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
SHC1P29353 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.81
SHC1P29353 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SHC1P29353 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.71□□□□□ -1.82
SHC1P29353 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SHC1P29353 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.71□□□□□ -1.82
SHC1P29353 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.71□□□□□ -1.82
SHC1P29353 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.71□□□□□ -1.82
SHC1P29353 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.71□□□□□ -1.82
SHC1P29353 SNORA70C-201ENST00000384538 135 ntBASIC3.71□□□□□ -1.82
SHC1P29353 RNU6-244P-201ENST00000391028 104 ntBASIC3.71□□□□□ -1.82
SHC1P29353 HSPD1P16-201ENST00000402302 394 ntBASIC3.71□□□□□ -1.82
SHC1P29353 HMGB3P31-201ENST00000413333 595 ntBASIC3.71□□□□□ -1.82
SHC1P29353 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.71□□□□□ -1.82
SHC1P29353 MTCO1P54-201ENST00000430139 712 ntBASIC3.71□□□□□ -1.82
SHC1P29353 HIGD1AP4-201ENST00000430194 280 ntBASIC3.71□□□□□ -1.82
SHC1P29353 NANOGP2-201ENST00000435391 727 ntBASIC3.71□□□□□ -1.82
SHC1P29353 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.71□□□□□ -1.82
SHC1P29353 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.71□□□□□ -1.82
SHC1P29353 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.71□□□□□ -1.82
SHC1P29353 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.71□□□□□ -1.82
SHC1P29353 OR6K5P-201ENST00000447050 945 ntBASIC3.71□□□□□ -1.82
SHC1P29353 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.71□□□□□ -1.82
SHC1P29353 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHC1P29353 RN7SL604P-201ENST00000492589 296 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms