Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN4P29074 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTPN4P29074 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 MIR23B-201ENST00000384832 97 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 PSMA2P3-201ENST00000429685 675 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN4P29074 RPL29P29-201ENST00000448725 423 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC087385.1-201ENST00000475062 312 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC021146.1-201ENST00000511202 716 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 C1DP5-201ENST00000525775 383 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC113192.3-201ENST00000529152 742 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 OR8L1P-201ENST00000534005 955 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 OR6C73P-201ENST00000546432 358 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 AC095057.3-201ENST00000567102 1157 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.98□□□□□ -1.77
PTPN4P29074 AL392048.1-201ENST00000613946 534 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTPN4P29074 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
PTPN4P29074 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN4P29074 AC119744.1-201ENST00000454746 1715 ntBASIC3.98□□□□□ -1.77
PTPN4P29074 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PTPN4P29074 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PTPN4P29074 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PTPN4P29074 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.97□□□□□ -1.77
PTPN4P29074 OR8G2P-201ENST00000412796 908 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 RPS15AP40-201ENST00000419621 391 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN4P29074 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN4P29074 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC092170.1-201ENST00000440211 356 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN4P29074 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 RPL36AP13-201ENST00000457490 317 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 SNORA84-201ENST00000459229 133 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 RPL37P6-202ENST00000464216 403 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC104689.1-201ENST00000473356 768 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN4P29074 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN4P29074 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 SAP18P1-201ENST00000512058 390 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.97□□□□□ -1.77
PTPN4P29074 MTCO1P49-201ENST00000523429 802 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 MTND1P6-201ENST00000523621 946 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN4P29074 AC009101.1-201ENST00000568135 242 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC099489.2-201ENST00000574976 260 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC006130.2-201ENST00000586202 326 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 BNIP3P33-201ENST00000598912 569 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC005776.1-201ENST00000603164 290 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 MTATP6P2-201ENST00000603319 678 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC112503.2-201ENST00000609005 552 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC121761.2-201ENST00000617300 689 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC006065.5-201ENST00000623427 349 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AP003400.6-201ENST00000624698 740 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AC092608.3-201ENST00000625017 386 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.97□□□□□ -1.77
PTPN4P29074 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN4P29074 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN4P29074 RLIMP1-201ENST00000339626 1680 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 CR381670.1-201ENST00000624291 1693 ntBASIC3.97□□□□□ -1.77
PTPN4P29074 AL122126.1-201ENST00000546905 1318 ntBASIC3.96□□□□□ -1.77
PTPN4P29074 AC011978.2-201ENST00000569835 2054 ntBASIC3.96□□□□□ -1.77
PTPN4P29074 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms