Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RNVU1-6-201ENST00000364688 164 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL133270.1-201ENST00000402635 279 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 RNU4-6P-201ENST00000410804 122 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RNU2-71P-201ENST00000411395 189 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 ELOCP19-201ENST00000411919 318 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RANP4-201ENST00000413361 655 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 CRYBB2P1-203ENST00000415709 538 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 HMGB3P20-201ENST00000417997 600 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 Z97055.1-201ENST00000419730 712 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL691449.1-201ENST00000426570 421 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 OR4F13P-201ENST00000428478 931 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 CNOT7P1-201ENST00000429006 852 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 Z74696.2-201ENST00000436514 498 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL513343.1-201ENST00000451818 792 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC099563.1-201ENST00000456086 418 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RPS23P7-201ENST00000466210 444 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 UQCRHP4-201ENST00000471686 272 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RPS3AP6-201ENST00000484430 795 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 RPL32P9-201ENST00000487963 407 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC010265.1-201ENST00000513509 211 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC016550.3-201ENST00000515706 767 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC022695.1-201ENST00000522089 237 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 OR4R3P-201ENST00000525084 838 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC010198.2-201ENST00000550612 259 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC006960.3-201ENST00000561845 705 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 MIR3138-201ENST00000585238 82 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC022387.2-201ENST00000604050 448 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL163642.2-201ENST00000604722 1019 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL021707.7-201ENST00000607991 416 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC114781.5-201ENST00000615297 108 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AP001784.1-201ENST00000624107 428 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC011944.2-201ENST00000624440 683 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 GTF2H2B-203ENST00000508065 1432 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DMAP28067 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 RNU6-819P-201ENST00000364116 107 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 RNU6-335P-201ENST00000364563 113 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 ENSAP1-201ENST00000392855 326 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 HMGB3P18-201ENST00000406327 590 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 LINC01881-201ENST00000416103 412 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 DNAJC19P7-201ENST00000428811 344 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 VDAC1P3-201ENST00000434069 851 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 TPTE2P6-202ENST00000445572 1007 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 MORF4L1P4-201ENST00000450245 976 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 RPL35AP28-201ENST00000459730 331 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC091167.1-201ENST00000492017 396 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC111193.1-201ENST00000504097 155 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC025674.1-201ENST00000507074 324 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 RNU6-491P-201ENST00000516099 110 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 NDUFA5P2-201ENST00000519723 344 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AP000926.4-201ENST00000527351 454 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 MTND2P26-201ENST00000528255 1029 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 MIR4474-201ENST00000579189 78 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 HMGN2P28-201ENST00000606102 262 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AL049539.1-201ENST00000611964 459 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AL121890.3-201ENST00000618494 516 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC022149.2-201ENST00000621061 203 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DMAP28067 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.91
HLA-DMAP28067 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DMAP28067 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms