Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 RNU6-283P-201ENST00000364788 107 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 RNU6-304P-201ENST00000364855 107 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 MTND3P20-201ENST00000407663 186 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 MTATP6P19-201ENST00000413797 659 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 MOB1AP1-201ENST00000430903 535 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 RPL21P110-201ENST00000433345 446 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 MTCYBP29-201ENST00000436327 1006 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
COL8A2P25067 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.96□□□□□ -1.94
COL8A2P25067 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.96□□□□□ -1.94
COL8A2P25067 AP000563.1-201ENST00000490865 758 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC026784.1-201ENST00000507986 352 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.96□□□□□ -1.94
COL8A2P25067 NDUFB9P3-201ENST00000521269 501 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.96□□□□□ -1.94
COL8A2P25067 AL133457.1-201ENST00000564251 987 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC012467.1-201ENST00000607740 256 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC009452.1-201ENST00000640823 606 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A2P25067 AC114546.3-201ENST00000623582 1734 ntBASIC2.96□□□□□ -1.94
COL8A2P25067 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.96□□□□□ -1.94
COL8A2P25067 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL8A2P25067 MTCO1P14-201ENST00000441695 1559 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.95□□□□□ -1.94
COL8A2P25067 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.95□□□□□ -1.94
COL8A2P25067 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC087565.3-202ENST00000642085 1603 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL8A2P25067 RNA5SP267-201ENST00000364893 126 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 OR52E6-202ENST00000379946 954 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 MIR92A2-201ENST00000385299 75 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL8A2P25067 PTMAP5-201ENST00000393073 333 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 RNU6-564P-201ENST00000410983 104 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 RN7SKP53-201ENST00000411337 315 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AC017079.2-201ENST00000416102 485 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AJ239321.1-201ENST00000424255 564 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC092013.1-201ENST00000438795 332 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC009263.1-201ENST00000441193 1239 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 RPS15AP29-201ENST00000445539 400 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 RPL5P13-201ENST00000462840 709 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC104629.2-201ENST00000468627 598 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AL358832.1-201ENST00000497800 389 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 WBP1LP4-201ENST00000505043 344 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 RNU6-579P-201ENST00000516879 102 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 IGKV2-26-201ENST00000518305 343 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC011611.1-201ENST00000552179 197 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC017100.2-201ENST00000584628 355 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 PSMA6P4-201ENST00000603247 718 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 AC006946.3-201ENST00000609791 756 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC104820.1-201ENST00000624183 307 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A2P25067 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL8A2P25067 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A2P25067 AL049781.1-201ENST00000623195 3585 ntBASIC2.95□□□□□ -1.94
COL8A2P25067 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms