Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MTCO3P1-205ENST00000422088 832 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AL035410.1-201ENST00000427409 427 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.65□□□□□ -1.67
BDNFP23560 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.65□□□□□ -1.67
BDNFP23560 NPM1P13-201ENST00000452663 865 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 SNRPGP3-201ENST00000469405 227 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC010618.1-201ENST00000469924 477 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.65□□□□□ -1.67
BDNFP23560 MTCO2P32-201ENST00000514865 403 ntBASIC4.65□□□□□ -1.67
BDNFP23560 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.65□□□□□ -1.67
BDNFP23560 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.65□□□□□ -1.67
BDNFP23560 PSMB7P1-201ENST00000556349 514 ntBASIC4.65□□□□□ -1.67
BDNFP23560 MIR3939-201ENST00000582614 106 ntBASIC4.65□□□□□ -1.67
BDNFP23560 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 AL035411.2-201ENST00000604022 421 ntBASIC4.65□□□□□ -1.67
BDNFP23560 Z82195.1-201ENST00000604558 398 ntBASIC4.65□□□□□ -1.67
BDNFP23560 ARF4P1-201ENST00000605447 541 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AP002360.3-201ENST00000607673 710 ntBASIC4.65□□□□□ -1.67
BDNFP23560 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 AL592148.2-201ENST00000612210 372 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC009237.17-201ENST00000618111 748 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AL512427.1-201ENST00000618593 349 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AC092650.2-201ENST00000619984 902 ntBASIC4.65□□□□□ -1.67
BDNFP23560 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.65□□□□□ -1.67
BDNFP23560 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.65□□□□□ -1.67
BDNFP23560 MAPK10-286ENST00000641208 8747 ntBASIC4.65□□□□□ -1.67
BDNFP23560 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BDNFP23560 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.64□□□□□ -1.67
BDNFP23560 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BDNFP23560 SNORA70.2-201ENST00000364506 135 ntBASIC4.64□□□□□ -1.67
BDNFP23560 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.64□□□□□ -1.67
BDNFP23560 OR6C69P-201ENST00000394268 893 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AL603865.2-201ENST00000401679 213 ntBASIC4.64□□□□□ -1.67
BDNFP23560 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.64□□□□□ -1.67
BDNFP23560 AC027644.1-201ENST00000419595 298 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC062016.2-201ENST00000420950 676 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.64□□□□□ -1.67
BDNFP23560 RPL23AP52-201ENST00000439311 478 ntBASIC4.64□□□□□ -1.67
BDNFP23560 PTGES3P1-201ENST00000439531 483 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AL645931.1-201ENST00000439737 410 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC114495.1-201ENST00000441274 436 ntBASIC4.64□□□□□ -1.67
BDNFP23560 HMGN1P5-201ENST00000448591 263 ntBASIC4.64□□□□□ -1.67
BDNFP23560 RPS24P6-201ENST00000452670 400 ntBASIC4.64□□□□□ -1.67
BDNFP23560 DDX39BP2-208ENST00000453923 258 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC106872.2-201ENST00000494303 480 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC084024.2-201ENST00000503480 791 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC093767.1-201ENST00000504523 156 ntBASIC4.64□□□□□ -1.67
BDNFP23560 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.64□□□□□ -1.67
BDNFP23560 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.64□□□□□ -1.67
BDNFP23560 IGKV2D-19-201ENST00000523346 262 ntBASIC4.64□□□□□ -1.67
BDNFP23560 NDUFS5P6-201ENST00000529136 295 ntBASIC4.64□□□□□ -1.67
BDNFP23560 LRRC6P1-201ENST00000532188 885 ntBASIC4.64□□□□□ -1.67
BDNFP23560 TRAV8-5-201ENST00000537369 341 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC008127.2-201ENST00000549925 1075 ntBASIC4.64□□□□□ -1.67
BDNFP23560 PARP1P2-201ENST00000556806 195 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.64□□□□□ -1.67
BDNFP23560 AL160290.3-201ENST00000604869 165 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AL583856.2-201ENST00000606298 543 ntBASIC4.64□□□□□ -1.67
BDNFP23560 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
BDNFP23560 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AL157770.1-201ENST00000623049 439 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC126544.2-201ENST00000625174 749 ntBASIC4.64□□□□□ -1.67
BDNFP23560 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.64□□□□□ -1.67
BDNFP23560 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 AC139713.2-215ENST00000641428 5037 ntBASIC4.64□□□□□ -1.67
BDNFP23560 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
BDNFP23560 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BDNFP23560 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 AC000367.1-201ENST00000452711 1766 ntBASIC4.63□□□□□ -1.67
BDNFP23560 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
BDNFP23560 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.63□□□□□ -1.67
BDNFP23560 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 RNA5SP235-201ENST00000365411 114 ntBASIC4.63□□□□□ -1.67
BDNFP23560 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 MIR217-201ENST00000384817 110 ntBASIC4.63□□□□□ -1.67
BDNFP23560 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.63□□□□□ -1.67
BDNFP23560 LAP3P1-201ENST00000403648 294 ntBASIC4.63□□□□□ -1.67
BDNFP23560 NRBF2P2-201ENST00000413087 861 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 RAD23BP2-201ENST00000416003 1207 ntBASIC4.63□□□□□ -1.67
BDNFP23560 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.63□□□□□ -1.67
BDNFP23560 AC093698.1-201ENST00000423843 571 ntBASIC4.63□□□□□ -1.67
BDNFP23560 RSL24D1P6-201ENST00000426934 401 ntBASIC4.63□□□□□ -1.67
BDNFP23560 Z93242.1-201ENST00000427102 353 ntBASIC4.63□□□□□ -1.67
BDNFP23560 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BDNFP23560 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms