Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 AC092121.1-201ENST00000569452 202 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 AC119403.2-201ENST00000590960 598 ntBASIC6.58□□□□□ -1.36
RFX1P22670 RFPL4AP6-201ENST00000616792 846 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AC233309.1-201ENST00000619522 751 ntBASIC6.58□□□□□ -1.36
RFX1P22670 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 AL591135.1-201ENST00000401578 5914 ntBASIC6.57□□□□□ -1.36
RFX1P22670 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 AL355834.1-201ENST00000556602 3965 ntBASIC6.57□□□□□ -1.36
RFX1P22670 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 AC024587.1-201ENST00000505925 2157 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC107027.3-201ENST00000565095 3473 ntBASIC6.57□□□□□ -1.36
RFX1P22670 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFX1P22670 RNU105B-201ENST00000364478 208 ntBASIC6.57□□□□□ -1.36
RFX1P22670 Y_RNA.255-201ENST00000364581 97 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 MIR1-2-201ENST00000384961 85 ntBASIC6.57□□□□□ -1.36
RFX1P22670 MIR130B-202ENST00000385018 82 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL136116.1-201ENST00000403591 381 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL049697.2-201ENST00000403708 294 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX1P22670 RPS26P47-201ENST00000427219 348 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX1P22670 RPL12P17-201ENST00000432393 498 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC127537.2-201ENST00000439258 465 ntBASIC6.57□□□□□ -1.36
RFX1P22670 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 AC124945.1-201ENST00000485133 188 ntBASIC6.57□□□□□ -1.36
RFX1P22670 NIPA2P2-201ENST00000496376 1083 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC021146.1-201ENST00000511202 716 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC027026.1-201ENST00000532323 742 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 AC079600.1-201ENST00000550326 297 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC087477.6-201ENST00000559595 843 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.57□□□□□ -1.36
RFX1P22670 AC037471.2-201ENST00000564941 598 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX1P22670 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.57□□□□□ -1.36
RFX1P22670 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 AC007566.2-201ENST00000603642 413 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AC004853.1-201ENST00000604902 698 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 AL138713.1-201ENST00000624026 2130 ntBASIC6.57□□□□□ -1.36
RFX1P22670 AL159972.1-201ENST00000625150 448 ntBASIC6.57□□□□□ -1.36
RFX1P22670 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.57□□□□□ -1.36
RFX1P22670 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RFX1P22670 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFX1P22670 SAGE2P-201ENST00000420011 2126 ntBASIC6.56□□□□□ -1.36
RFX1P22670 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 AC009951.1-201ENST00000623674 2614 ntBASIC6.56□□□□□ -1.36
RFX1P22670 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RFX1P22670 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 AC008758.3-201ENST00000507003 1829 ntBASIC6.56□□□□□ -1.36
RFX1P22670 SNORA51.2-201ENST00000364595 132 ntBASIC6.56□□□□□ -1.36
RFX1P22670 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 RN7SKP32-201ENST00000410167 303 ntBASIC6.56□□□□□ -1.36
RFX1P22670 RNA5SP156-201ENST00000410250 110 ntBASIC6.56□□□□□ -1.36
RFX1P22670 RN7SKP286-201ENST00000410894 299 ntBASIC6.56□□□□□ -1.36
RFX1P22670 MYL6P5-201ENST00000412707 459 ntBASIC6.56□□□□□ -1.36
RFX1P22670 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 MTCO3P46-201ENST00000425787 232 ntBASIC6.56□□□□□ -1.36
RFX1P22670 SRIP2-201ENST00000428470 166 ntBASIC6.56□□□□□ -1.36
RFX1P22670 DNAJC19P5-201ENST00000443295 316 ntBASIC6.56□□□□□ -1.36
RFX1P22670 RPL36AP39-201ENST00000445859 318 ntBASIC6.56□□□□□ -1.36
RFX1P22670 AL353691.1-201ENST00000451332 387 ntBASIC6.56□□□□□ -1.36
RFX1P22670 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX1P22670 NANOGP10-201ENST00000453325 895 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms