Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 RPL21P99-201ENST00000480369 423 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 RPL23AP41-201ENST00000484754 458 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC025164.1-201ENST00000496249 478 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.07□□□□□ -1.44
NFKB1P19838 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.07□□□□□ -1.44
NFKB1P19838 EIF3KP3-201ENST00000514461 639 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 HSD3BP3-201ENST00000514706 994 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 RNU6-1137P-201ENST00000517073 99 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 IGKV3D-25-201ENST00000519599 235 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.07□□□□□ -1.44
NFKB1P19838 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.07□□□□□ -1.44
NFKB1P19838 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 APOOP3-201ENST00000536787 586 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 AC007938.3-201ENST00000604965 623 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AL021918.2-201ENST00000613415 194 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 AC005224.3-201ENST00000584683 2140 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC011493.1-201ENST00000596753 1632 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NFKB1P19838 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.06□□□□□ -1.44
NFKB1P19838 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 AC007159.1-201ENST00000566529 4706 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.06□□□□□ -1.44
NFKB1P19838 Y_RNA.367-201ENST00000365544 101 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NFKB1P19838 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 AC022022.1-201ENST00000430304 178 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 PNKDP1-201ENST00000435914 430 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 AL138799.3-201ENST00000438968 350 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 RPS7P3-201ENST00000443360 580 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.06□□□□□ -1.44
NFKB1P19838 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.06□□□□□ -1.44
NFKB1P19838 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.06□□□□□ -1.44
NFKB1P19838 AC024558.1-201ENST00000505008 528 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 AC091885.1-201ENST00000506658 268 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 RNU6-864P-201ENST00000516256 108 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 IGLVIV-64-201ENST00000518581 301 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.06□□□□□ -1.44
NFKB1P19838 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 AP005119.1-201ENST00000580956 292 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 MIR6806-201ENST00000622141 64 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 SNX18P12-201ENST00000624821 759 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.06□□□□□ -1.44
NFKB1P19838 AC004972.1-201ENST00000623934 2209 ntBASIC6.06□□□□□ -1.44
NFKB1P19838 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NFKB1P19838 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NFKB1P19838 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 MTND4P1-201ENST00000457501 1466 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 AP000432.2-201ENST00000624164 2048 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 AL161781.1-201ENST00000354277 403 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 Y_RNA.112-201ENST00000363250 102 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 U3.12-201ENST00000364498 214 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RNU6-1013P-201ENST00000384180 107 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RNU6-225P-201ENST00000384613 103 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AL133384.1-201ENST00000412744 351 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AL354890.1-201ENST00000413730 346 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms