Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
ERCC2P18074 ELOCP28-201ENST00000590044 317 ntBASIC4.21□□□□□ -1.74
ERCC2P18074 AC083809.1-201ENST00000615051 472 ntBASIC4.21□□□□□ -1.74
ERCC2P18074 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.21□□□□□ -1.74
ERCC2P18074 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ERCC2P18074 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.21□□□□□ -1.74
ERCC2P18074 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ERCC2P18074 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.74
ERCC2P18074 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ERCC2P18074 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.21□□□□□ -1.74
ERCC2P18074 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC2P18074 SAGE4P-201ENST00000442271 3381 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 Z82217.1-201ENST00000625157 8149 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 RNU6-582P-201ENST00000362989 107 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 SNORD35B-201ENST00000363660 87 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 RNU1-85P-201ENST00000364127 164 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 SNORA62-201ENST00000365493 153 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 SNORD116-23-201ENST00000384645 92 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 MIR122-201ENST00000385044 85 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 Y_RNA.578-201ENST00000390903 88 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC108032.1-201ENST00000416706 207 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 MTND4P3-201ENST00000417829 541 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 IFNNP1-201ENST00000429219 553 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 AL356276.2-201ENST00000435919 558 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 SNORD108-201ENST00000459332 71 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 RPL38P1-201ENST00000460914 211 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.2□□□□□ -1.74
ERCC2P18074 MTATP6P9-201ENST00000515039 680 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 IGKV2-38-201ENST00000517443 247 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 HIGD1AP5-201ENST00000529959 259 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.2□□□□□ -1.74
ERCC2P18074 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 CENPUP2-201ENST00000555897 1186 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC074051.3-201ENST00000570238 358 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC025627.2-201ENST00000576220 160 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.2□□□□□ -1.74
ERCC2P18074 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.2□□□□□ -1.74
ERCC2P18074 AL445435.1-201ENST00000604232 665 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AL451044.1-201ENST00000604867 238 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC012603.1-201ENST00000606424 528 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 OR6R2P-201ENST00000609216 300 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 AL158196.1-201ENST00000616786 434 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC006338.2-201ENST00000616864 791 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC006065.5-201ENST00000623427 349 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AC098679.5-201ENST00000624394 571 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 AP003485.1-201ENST00000625093 753 ntBASIC4.2□□□□□ -1.74
ERCC2P18074 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERCC2P18074 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.2□□□□□ -1.74
ERCC2P18074 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
ERCC2P18074 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC2P18074 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.19□□□□□ -1.74
ERCC2P18074 ZNF962P-201ENST00000443465 3140 ntBASIC4.19□□□□□ -1.74
ERCC2P18074 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC2P18074 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC2P18074 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
ERCC2P18074 SNORA60-201ENST00000362396 134 ntBASIC4.19□□□□□ -1.74
ERCC2P18074 RNU6-839P-201ENST00000363347 108 ntBASIC4.19□□□□□ -1.74
ERCC2P18074 AC068538.1-201ENST00000376856 336 ntBASIC4.19□□□□□ -1.74
ERCC2P18074 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC2P18074 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ERCC2P18074 TMSB4XP8-201ENST00000402089 135 ntBASIC4.19□□□□□ -1.74
ERCC2P18074 RSL24D1P1-201ENST00000404972 493 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms