Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SOD2P1-201ENST00000396543 562 ntBASIC3.9□□□□□ -1.79
TPM1P09493 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 GTF2IP23-201ENST00000423746 351 ntBASIC3.9□□□□□ -1.79
TPM1P09493 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 AL645931.1-201ENST00000439737 410 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 AC006326.1-201ENST00000445465 787 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC239367.2-201ENST00000447309 705 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM1P09493 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.9□□□□□ -1.79
TPM1P09493 AP000563.1-201ENST00000490865 758 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC092185.1-201ENST00000491371 97 ntBASIC3.9□□□□□ -1.79
TPM1P09493 KCTD9P5-201ENST00000504141 1170 ntBASIC3.9□□□□□ -1.79
TPM1P09493 ATG10-AS1-201ENST00000504846 648 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.9□□□□□ -1.79
TPM1P09493 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 OR4V1P-201ENST00000525394 1140 ntBASIC3.9□□□□□ -1.79
TPM1P09493 OR8L1P-201ENST00000534005 955 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.9□□□□□ -1.79
TPM1P09493 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.9□□□□□ -1.79
TPM1P09493 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.9□□□□□ -1.79
TPM1P09493 AL049870.4-201ENST00000555741 486 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC023158.1-201ENST00000561632 1025 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.9□□□□□ -1.79
TPM1P09493 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM1P09493 ZNF92P3-201ENST00000596594 954 ntBASIC3.9□□□□□ -1.79
TPM1P09493 AC104785.1-201ENST00000603220 588 ntBASIC3.9□□□□□ -1.79
TPM1P09493 MLECP1-201ENST00000615893 709 ntBASIC3.9□□□□□ -1.79
TPM1P09493 SNORA50A-202ENST00000629536 136 ntBASIC3.9□□□□□ -1.79
TPM1P09493 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TPM1P09493 AL049737.1-201ENST00000413920 1403 ntBASIC3.89□□□□□ -1.79
TPM1P09493 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TPM1P09493 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TPM1P09493 RNU6-452P-201ENST00000384406 107 ntBASIC3.89□□□□□ -1.79
TPM1P09493 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TPM1P09493 HMGB3P18-201ENST00000406327 590 ntBASIC3.89□□□□□ -1.79
TPM1P09493 RANP4-201ENST00000413361 655 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AC234782.4-201ENST00000417646 1048 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TPM1P09493 COX6CP17-201ENST00000421389 185 ntBASIC3.89□□□□□ -1.79
TPM1P09493 OR8F1P-201ENST00000425243 930 ntBASIC3.89□□□□□ -1.79
TPM1P09493 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TPM1P09493 BX890604.2-201ENST00000427883 474 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AL606490.7-201ENST00000433136 191 ntBASIC3.89□□□□□ -1.79
TPM1P09493 CEACAMP9-201ENST00000442990 513 ntBASIC3.89□□□□□ -1.79
TPM1P09493 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM1P09493 AC021205.2-201ENST00000480069 347 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AL139099.1-201ENST00000497398 403 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AC068657.1-201ENST00000520807 306 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM1P09493 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM1P09493 AP006245.1-201ENST00000522549 120 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM1P09493 AC026333.2-201ENST00000542164 106 ntBASIC3.89□□□□□ -1.79
TPM1P09493 OR6C73P-201ENST00000546432 358 ntBASIC3.89□□□□□ -1.79
TPM1P09493 TRAV37-201ENST00000553906 342 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.89□□□□□ -1.79
TPM1P09493 AC009303.3-201ENST00000591103 736 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AC009948.4-201ENST00000604692 675 ntBASIC3.89□□□□□ -1.79
TPM1P09493 MIR6864-201ENST00000617935 70 ntBASIC3.89□□□□□ -1.79
TPM1P09493 FP236240.3-201ENST00000623061 327 ntBASIC3.89□□□□□ -1.79
TPM1P09493 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.89□□□□□ -1.79
TPM1P09493 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TPM1P09493 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.89□□□□□ -1.79
TPM1P09493 MTND4P31-201ENST00000425607 1343 ntBASIC3.89□□□□□ -1.79
TPM1P09493 AC007823.1-201ENST00000569932 1566 ntBASIC3.89□□□□□ -1.79
TPM1P09493 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TPM1P09493 AC138915.3-201ENST00000562908 1389 ntBASIC3.89□□□□□ -1.79
TPM1P09493 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TPM1P09493 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 MTND5P27-201ENST00000428871 1720 ntBASIC3.88□□□□□ -1.79
TPM1P09493 AL121657.1-201ENST00000327215 531 ntBASIC3.88□□□□□ -1.79
TPM1P09493 RNU1-32P-201ENST00000363937 159 ntBASIC3.88□□□□□ -1.79
TPM1P09493 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AL160175.1-201ENST00000428124 247 ntBASIC3.88□□□□□ -1.79
TPM1P09493 RPS27AP12-201ENST00000429552 465 ntBASIC3.88□□□□□ -1.79
TPM1P09493 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.88□□□□□ -1.79
TPM1P09493 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TPM1P09493 AC114755.5-201ENST00000447760 831 ntBASIC3.88□□□□□ -1.79
TPM1P09493 RN7SL594P-201ENST00000470590 287 ntBASIC3.88□□□□□ -1.79
TPM1P09493 AC114967.1-201ENST00000504890 259 ntBASIC3.88□□□□□ -1.79
TPM1P09493 AC093755.1-201ENST00000512950 1023 ntBASIC3.88□□□□□ -1.79
TPM1P09493 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
TPM1P09493 SCARNA14-201ENST00000516903 136 ntBASIC3.88□□□□□ -1.79
TPM1P09493 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AC107934.2-201ENST00000518653 310 ntBASIC3.88□□□□□ -1.79
TPM1P09493 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.88□□□□□ -1.79
TPM1P09493 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms