Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RN7SL808P-201ENST00000496066 299 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P09429 AC008638.1-201ENST00000506035 866 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 XKRY-201ENST00000510392 1100 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 AC021146.1-201ENST00000511202 716 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 RNY4P37-201ENST00000516225 96 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P09429 IGKV2D-19-201ENST00000523346 262 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P09429 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB1P09429 AP000676.2-201ENST00000529711 301 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 AC021006.3-201ENST00000530771 192 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P09429 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P09429 HSPE1P3-201ENST00000559254 309 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P09429 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB1P09429 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P09429 AC144521.1-201ENST00000607148 956 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 AC024933.1-201ENST00000608472 348 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 MIR7155-201ENST00000615925 56 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.64□□□□□ -1.51
HMGB1P09429 AP001784.1-201ENST00000624107 428 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P09429 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P09429 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGB1P09429 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P09429 MAPK10-303ENST00000641324 3959 ntBASIC5.64□□□□□ -1.51
HMGB1P09429 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P09429 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGB1P09429 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
HMGB1P09429 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL590762.2-201ENST00000395798 571 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 COX6B1P1-201ENST00000415962 213 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC245052.5-201ENST00000416320 649 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL513175.2-201ENST00000422071 443 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 MTND2P5-201ENST00000432656 1006 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 NECAP1P2-201ENST00000455668 727 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 RN7SL481P-201ENST00000477764 299 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 RPL7P16-201ENST00000479738 738 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 AC023424.2-201ENST00000493479 777 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC134050.1-201ENST00000495088 933 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC096751.1-202ENST00000502691 1067 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 UBE2CP3-201ENST00000502715 450 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 OR5M14P-201ENST00000506803 618 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 KLHL2P1-201ENST00000508691 521 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 TPT1P8-201ENST00000510120 555 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P09429 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P09429 MIR4646-201ENST00000580775 63 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P09429 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 DUXAP3-201ENST00000603616 594 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AP001330.4-201ENST00000604350 154 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AL451074.6-201ENST00000608512 729 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 AC022106.2-201ENST00000620114 757 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 MTND4P26-201ENST00000415971 1359 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P09429 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P09429 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 OTUD4P1-201ENST00000237841 3067 ntBASIC5.63□□□□□ -1.51
HMGB1P09429 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P09429 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HMGB1P09429 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HMGB1P09429 AL672296.1-201ENST00000427780 2158 ntBASIC5.62□□□□□ -1.51
HMGB1P09429 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGB1P09429 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.62□□□□□ -1.51
HMGB1P09429 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P09429 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P09429 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGB1P09429 RNU1-83P-201ENST00000363426 164 ntBASIC5.62□□□□□ -1.51
HMGB1P09429 SNORD116.1-201ENST00000365628 92 ntBASIC5.62□□□□□ -1.51
HMGB1P09429 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P09429 Y_RNA.465-201ENST00000384293 102 ntBASIC5.62□□□□□ -1.51
HMGB1P09429 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB1P09429 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P09429 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms