Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
APOA1P02647 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
APOA1P02647 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOA1P02647 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.3□□□□□ -1.88
APOA1P02647 AC108157.1-201ENST00000510511 539 ntBASIC3.3□□□□□ -1.88
APOA1P02647 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.3□□□□□ -1.88
APOA1P02647 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.3□□□□□ -1.88
APOA1P02647 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.3□□□□□ -1.88
APOA1P02647 MTCO3P24-201ENST00000572729 782 ntBASIC3.3□□□□□ -1.88
APOA1P02647 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
APOA1P02647 CBX3P2-202ENST00000583365 535 ntBASIC3.3□□□□□ -1.88
APOA1P02647 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.3□□□□□ -1.88
APOA1P02647 RPL12P25-202ENST00000598100 674 ntBASIC3.3□□□□□ -1.88
APOA1P02647 MIR6868-201ENST00000611215 58 ntBASIC3.3□□□□□ -1.88
APOA1P02647 AL390240.1-201ENST00000612950 384 ntBASIC3.3□□□□□ -1.88
APOA1P02647 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.3□□□□□ -1.88
APOA1P02647 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
APOA1P02647 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
APOA1P02647 AC139713.2-214ENST00000642059 1811 ntBASIC3.3□□□□□ -1.88
APOA1P02647 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOA1P02647 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOA1P02647 AL079305.1-201ENST00000623159 3008 ntBASIC3.3□□□□□ -1.88
APOA1P02647 AC073055.1-201ENST00000456901 1621 ntBASIC3.3□□□□□ -1.88
APOA1P02647 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
APOA1P02647 MTND5P28-201ENST00000438005 1594 ntBASIC3.29□□□□□ -1.88
APOA1P02647 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 ELL2P4-201ENST00000446870 1376 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AL122126.1-201ENST00000546905 1318 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC116096.1-201ENST00000566804 2314 ntBASIC3.29□□□□□ -1.88
APOA1P02647 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RNU1-132P-201ENST00000364300 164 ntBASIC3.29□□□□□ -1.88
APOA1P02647 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.29□□□□□ -1.88
APOA1P02647 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.29□□□□□ -1.88
APOA1P02647 AL513175.1-201ENST00000431492 780 ntBASIC3.29□□□□□ -1.88
APOA1P02647 MRPS18BP2-201ENST00000434310 759 ntBASIC3.29□□□□□ -1.88
APOA1P02647 B3GNT2P1-201ENST00000434960 952 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RPS3AP54-201ENST00000435535 734 ntBASIC3.29□□□□□ -1.88
APOA1P02647 TRIM60P18-201ENST00000441518 828 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RPL7P59-201ENST00000447700 943 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RPS15AP1-201ENST00000457423 391 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RPS4XP2-201ENST00000458402 793 ntBASIC3.29□□□□□ -1.88
APOA1P02647 RPL21P11-201ENST00000461458 483 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC004453.1-201ENST00000487895 408 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
APOA1P02647 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.29□□□□□ -1.88
APOA1P02647 NDUFB5P1-201ENST00000508134 564 ntBASIC3.29□□□□□ -1.88
APOA1P02647 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 C1DP5-201ENST00000525775 383 ntBASIC3.29□□□□□ -1.88
APOA1P02647 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.29□□□□□ -1.88
APOA1P02647 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOA1P02647 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
APOA1P02647 AC090888.3-201ENST00000558917 509 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.29□□□□□ -1.88
APOA1P02647 MTCYBP28-201ENST00000566728 1132 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC005951.1-201ENST00000576706 485 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 MIR6780A-201ENST00000615089 68 ntBASIC3.29□□□□□ -1.88
APOA1P02647 AC100827.5-201ENST00000615883 426 ntBASIC3.29□□□□□ -1.88
APOA1P02647 U6.107-201ENST00000637108 79 ntBASIC3.29□□□□□ -1.88
APOA1P02647 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.29□□□□□ -1.88
APOA1P02647 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
APOA1P02647 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOA1P02647 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.29□□□□□ -1.88
APOA1P02647 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
APOA1P02647 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
APOA1P02647 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
APOA1P02647 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APOA1P02647 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APOA1P02647 DSTNP4-201ENST00000399472 474 ntBASIC3.28□□□□□ -1.88
APOA1P02647 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
APOA1P02647 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
APOA1P02647 EIF2S2P3-201ENST00000428356 999 ntBASIC3.28□□□□□ -1.88
APOA1P02647 MTCO1P57-201ENST00000432182 261 ntBASIC3.28□□□□□ -1.88
APOA1P02647 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.28□□□□□ -1.88
APOA1P02647 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.28□□□□□ -1.88
APOA1P02647 RPS7P2-201ENST00000435134 607 ntBASIC3.28□□□□□ -1.88
APOA1P02647 VN1R54P-201ENST00000435210 1049 ntBASIC3.28□□□□□ -1.88
APOA1P02647 MTND2P21-201ENST00000436242 1042 ntBASIC3.28□□□□□ -1.88
APOA1P02647 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.28□□□□□ -1.88
APOA1P02647 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.28□□□□□ -1.88
APOA1P02647 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOA1P02647 RPS11P1-201ENST00000451072 473 ntBASIC3.28□□□□□ -1.88
APOA1P02647 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
APOA1P02647 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
APOA1P02647 AC010285.1-201ENST00000470580 392 ntBASIC3.28□□□□□ -1.88
APOA1P02647 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.28□□□□□ -1.88
APOA1P02647 RN7SL629P-201ENST00000489622 285 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms