Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.578-201ENST00000390903 88 ntBASIC4.87□□□□□ -1.63
MBD4O95243 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.87□□□□□ -1.63
MBD4O95243 RPL31P45-201ENST00000419532 356 ntBASIC4.87□□□□□ -1.63
MBD4O95243 OR2X1P-201ENST00000421144 687 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.87□□□□□ -1.63
MBD4O95243 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.87□□□□□ -1.63
MBD4O95243 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.87□□□□□ -1.63
MBD4O95243 RPL36P19-201ENST00000430744 301 ntBASIC4.87□□□□□ -1.63
MBD4O95243 HLA-N-201ENST00000437516 135 ntBASIC4.87□□□□□ -1.63
MBD4O95243 MTCYBP42-201ENST00000444653 1130 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC104306.1-201ENST00000449702 371 ntBASIC4.87□□□□□ -1.63
MBD4O95243 RPS11P1-201ENST00000451072 473 ntBASIC4.87□□□□□ -1.63
MBD4O95243 BX276092.4-201ENST00000452056 248 ntBASIC4.87□□□□□ -1.63
MBD4O95243 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.87□□□□□ -1.63
MBD4O95243 RPS26P28-201ENST00000470806 348 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC087879.1-201ENST00000474343 374 ntBASIC4.87□□□□□ -1.63
MBD4O95243 RPL21P103-201ENST00000479921 488 ntBASIC4.87□□□□□ -1.63
MBD4O95243 CAB39P1-201ENST00000502277 460 ntBASIC4.87□□□□□ -1.63
MBD4O95243 PPBPP1-201ENST00000510807 373 ntBASIC4.87□□□□□ -1.63
MBD4O95243 RNA5SP135-201ENST00000517019 125 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.87□□□□□ -1.63
MBD4O95243 MTCO3P15-201ENST00000526563 574 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.87□□□□□ -1.63
MBD4O95243 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.87□□□□□ -1.63
MBD4O95243 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.87□□□□□ -1.63
MBD4O95243 AC044913.1-201ENST00000557200 430 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AL121834.1-201ENST00000572284 509 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC025627.2-201ENST00000576220 160 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC099676.1-201ENST00000608886 657 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AP005137.2-201ENST00000609238 400 ntBASIC4.87□□□□□ -1.63
MBD4O95243 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MBD4O95243 AC099654.9-201ENST00000637055 678 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AC009452.1-201ENST00000640823 606 ntBASIC4.87□□□□□ -1.63
MBD4O95243 AL136964.1-201ENST00000622038 2990 ntBASIC4.87□□□□□ -1.63
MBD4O95243 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MBD4O95243 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
MBD4O95243 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.87□□□□□ -1.63
MBD4O95243 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MBD4O95243 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MBD4O95243 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MBD4O95243 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 SNORA60-201ENST00000362396 134 ntBASIC4.86□□□□□ -1.63
MBD4O95243 RNU6-1243P-201ENST00000364028 107 ntBASIC4.86□□□□□ -1.63
MBD4O95243 SNORA70E-201ENST00000384492 135 ntBASIC4.86□□□□□ -1.63
MBD4O95243 MIR122-201ENST00000385044 85 ntBASIC4.86□□□□□ -1.63
MBD4O95243 MTCO1P56-201ENST00000401674 224 ntBASIC4.86□□□□□ -1.63
MBD4O95243 BTBD10P2-201ENST00000404779 676 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 RPS12P23-201ENST00000419579 400 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL691449.1-201ENST00000426570 421 ntBASIC4.86□□□□□ -1.63
MBD4O95243 MTCYBP32-201ENST00000427945 1084 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 PPIAP17-201ENST00000438507 471 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 MTND1P6-201ENST00000523621 946 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 DEFB130C-202ENST00000530001 230 ntBASIC4.86□□□□□ -1.63
MBD4O95243 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MBD4O95243 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.86□□□□□ -1.63
MBD4O95243 CENPUP2-201ENST00000555897 1186 ntBASIC4.86□□□□□ -1.63
MBD4O95243 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.86□□□□□ -1.63
MBD4O95243 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.86□□□□□ -1.63
MBD4O95243 CYP4A43P-201ENST00000568156 121 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AC122134.1-202ENST00000569111 1201 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AC012417.1-201ENST00000582307 1039 ntBASIC4.86□□□□□ -1.63
MBD4O95243 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 AL583856.2-201ENST00000606298 543 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL354760.1-201ENST00000608357 643 ntBASIC4.86□□□□□ -1.63
MBD4O95243 MIR6875-201ENST00000617506 72 ntBASIC4.86□□□□□ -1.63
MBD4O95243 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 AP005264.7-201ENST00000625003 745 ntBASIC4.86□□□□□ -1.63
MBD4O95243 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 ELL2P4-201ENST00000446870 1376 ntBASIC4.86□□□□□ -1.63
MBD4O95243 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
MBD4O95243 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.85□□□□□ -1.63
MBD4O95243 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 RN7SKP280-201ENST00000364196 304 ntBASIC4.85□□□□□ -1.63
MBD4O95243 SNORA37-201ENST00000384504 129 ntBASIC4.85□□□□□ -1.63
MBD4O95243 MIR153-1-201ENST00000384914 90 ntBASIC4.85□□□□□ -1.63
MBD4O95243 HSPD1P16-201ENST00000402302 394 ntBASIC4.85□□□□□ -1.63
MBD4O95243 RSL24D1P1-201ENST00000404972 493 ntBASIC4.85□□□□□ -1.63
MBD4O95243 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AL160275.2-201ENST00000412010 394 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AL450992.3-201ENST00000413192 568 ntBASIC4.85□□□□□ -1.63
MBD4O95243 RPS3AP9-201ENST00000417027 792 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.85□□□□□ -1.63
MBD4O95243 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.85□□□□□ -1.63
MBD4O95243 Z77249.1-201ENST00000444622 1175 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms