Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.08□□□□□ -1.92
UPK1BO75841 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 CABYRP1-201ENST00000465493 1045 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC146507.1-201ENST00000468335 354 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 RPL21P18-201ENST00000469899 480 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1BO75841 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1BO75841 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.08□□□□□ -1.92
UPK1BO75841 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
UPK1BO75841 AC007225.2-201ENST00000562529 256 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1BO75841 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 IPO5P1-202ENST00000600039 287 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC004775.1-201ENST00000607389 753 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1BO75841 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1BO75841 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1BO75841 AC104446.1-201ENST00000613728 1321 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.08□□□□□ -1.92
UPK1BO75841 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1BO75841 AL590763.1-201ENST00000398297 1545 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1BO75841 NSRP1P1-201ENST00000444067 1693 ntBASIC3.08□□□□□ -1.92
UPK1BO75841 AC091152.2-201ENST00000591628 2569 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC107081.3-201ENST00000612715 2034 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 OR52E6-202ENST00000379946 954 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 ENSAP1-201ENST00000392855 326 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AL355379.1-201ENST00000405542 640 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 COX6CP17-201ENST00000421389 185 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC104837.2-201ENST00000427236 424 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 RPS27AP12-201ENST00000429552 465 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 HMGB3P11-201ENST00000440127 604 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 RN7SL594P-201ENST00000470590 287 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 RPS3AP6-201ENST00000484430 795 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 RN7SL101P-201ENST00000496350 279 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC008953.1-201ENST00000497334 318 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 TMEM248P1-201ENST00000510579 951 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 OR7H2P-201ENST00000513483 306 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC016065.2-201ENST00000514530 444 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 RN7SKP96-201ENST00000516948 297 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC022695.1-201ENST00000522089 237 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 IGKV3D-34-201ENST00000522638 302 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 OR6C73P-201ENST00000546432 358 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC012146.2-201ENST00000576545 416 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC007687.1-201ENST00000602704 304 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1BO75841 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 AP000553.6-201ENST00000641242 118 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 SEPT7P7-201ENST00000420492 1301 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 MTND4P8-201ENST00000514997 1362 ntBASIC3.07□□□□□ -1.92
UPK1BO75841 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1BO75841 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1BO75841 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1BO75841 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1BO75841 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1BO75841 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1BO75841 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1BO75841 RNU6-1005P-201ENST00000384519 107 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 SOD2P1-201ENST00000396543 562 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AL356057.1-202ENST00000402263 756 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.06□□□□□ -1.92
UPK1BO75841 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms