Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS4BO75351 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS4BO75351 UBTFL3-201ENST00000418934 1024 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS4BO75351 NMNAT1P2-201ENST00000435192 860 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS4BO75351 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS4BO75351 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS4BO75351 USP9YP29-201ENST00000445112 563 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS4BO75351 TRGVB-201ENST00000453257 471 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AP000942.1-201ENST00000463969 747 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 RPL30P9-201ENST00000465586 330 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 UBTFL6-201ENST00000477929 1024 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 RPL7P16-201ENST00000479738 738 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC008897.1-201ENST00000494006 347 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS4BO75351 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 RNU6-583P-201ENST00000516012 92 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 Y_RNA.719-201ENST00000517156 106 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 DEFB131D-201ENST00000526803 184 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS4BO75351 TOMM20P2-201ENST00000540082 421 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS4BO75351 AL389895.1-201ENST00000554127 252 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 PSMB7P1-201ENST00000556349 514 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS4BO75351 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS4BO75351 CYCSP40-201ENST00000575927 294 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 MIR4270-201ENST00000581799 70 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS4BO75351 AC087683.1-201ENST00000591187 441 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC022146.1-201ENST00000595307 847 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AL139286.2-201ENST00000606838 396 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC093799.2-201ENST00000610062 578 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 AC010678.1-201ENST00000614118 713 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AC015540.1-201ENST00000615828 501 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 OR5BR1P-201ENST00000524992 1330 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS4BO75351 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VPS4BO75351 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS4BO75351 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS4BO75351 AL359922.3-201ENST00000624779 1670 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
VPS4BO75351 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 RN7SKP104-201ENST00000362605 328 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 RNU1-32P-201ENST00000363937 159 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 SNORA75-201ENST00000384158 137 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VPS4BO75351 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 PRRC2CP1-201ENST00000404428 159 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AL078604.1-201ENST00000404609 466 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 RNU2-50P-201ENST00000410494 143 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC007899.1-201ENST00000412776 775 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC008280.1-201ENST00000418851 412 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AL953862.1-201ENST00000423016 168 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC073335.1-201ENST00000427776 363 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC092162.1-201ENST00000432828 434 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC010881.1-201ENST00000433830 235 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 PRPF38AP2-201ENST00000438179 851 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS4BO75351 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AL691482.1-201ENST00000453255 87 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 SNRPGP9-201ENST00000456025 225 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 ARPC3P2-201ENST00000457786 533 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 RN7SL459P-201ENST00000481078 302 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 AC090071.1-201ENST00000507713 644 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 RNU6-202P-201ENST00000515998 96 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 IGHV3-32-201ENST00000519182 355 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS4BO75351 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS4BO75351 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms