Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IRF5P1-201ENST00000504852 2164 ntBASIC6.01□□□□□ -1.45
SOX1O00570 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
SOX1O00570 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
SOX1O00570 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX1O00570 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX1O00570 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX1O00570 SNORA17.1-201ENST00000362945 126 ntBASIC6.01□□□□□ -1.45
SOX1O00570 MIR559-201ENST00000385188 96 ntBASIC6.01□□□□□ -1.45
SOX1O00570 BTBD10P2-201ENST00000404779 676 ntBASIC6.01□□□□□ -1.45
SOX1O00570 RN7SKP126-201ENST00000411143 300 ntBASIC6.01□□□□□ -1.45
SOX1O00570 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.01□□□□□ -1.45
SOX1O00570 TPMTP2-201ENST00000414372 726 ntBASIC6.01□□□□□ -1.45
SOX1O00570 OR2AM1P-201ENST00000422137 422 ntBASIC6.01□□□□□ -1.45
SOX1O00570 SETP9-201ENST00000423837 832 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 ATP5JP1-201ENST00000431631 322 ntBASIC6.01□□□□□ -1.45
SOX1O00570 HMGN3P1-201ENST00000453847 193 ntBASIC6.01□□□□□ -1.45
SOX1O00570 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 RPL31P50-201ENST00000471002 296 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AC022034.3-201ENST00000471393 478 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AC010301.1-201ENST00000473936 355 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX1O00570 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX1O00570 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 AC073916.1-201ENST00000545095 130 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX1O00570 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX1O00570 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 AC017100.2-201ENST00000584628 355 ntBASIC6.01□□□□□ -1.45
SOX1O00570 VN1R84P-201ENST00000593697 235 ntBASIC6.01□□□□□ -1.45
SOX1O00570 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.01□□□□□ -1.45
SOX1O00570 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX1O00570 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.01□□□□□ -1.45
SOX1O00570 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX1O00570 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
SOX1O00570 OR52H1-202ENST00000641796 1061 ntBASIC6.01□□□□□ -1.45
SOX1O00570 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX1O00570 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SOX1O00570 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX1O00570 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SOX1O00570 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6□□□□□ -1.45
SOX1O00570 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6□□□□□ -1.45
SOX1O00570 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
SOX1O00570 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 AL118496.1-201ENST00000440201 1812 ntBASIC6□□□□□ -1.45
SOX1O00570 MFSD8-219ENST00000641228 2559 ntBASIC6□□□□□ -1.45
SOX1O00570 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 RNU5E-1-201ENST00000362477 120 ntBASIC6□□□□□ -1.45
SOX1O00570 Y_RNA.144-201ENST00000363521 113 ntBASIC6□□□□□ -1.45
SOX1O00570 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX1O00570 SNORA32.2-201ENST00000384049 122 ntBASIC6□□□□□ -1.45
SOX1O00570 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX1O00570 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SOX1O00570 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6□□□□□ -1.45
SOX1O00570 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6□□□□□ -1.45
SOX1O00570 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6□□□□□ -1.45
SOX1O00570 GPM6BP2-201ENST00000432046 144 ntBASIC6□□□□□ -1.45
SOX1O00570 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6□□□□□ -1.45
SOX1O00570 AL031663.1-201ENST00000437445 219 ntBASIC6□□□□□ -1.45
SOX1O00570 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 MTND3P2-201ENST00000438452 342 ntBASIC6□□□□□ -1.45
SOX1O00570 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6□□□□□ -1.45
SOX1O00570 FAM103A2P-201ENST00000444122 354 ntBASIC6□□□□□ -1.45
SOX1O00570 GPM6BP1-201ENST00000446387 144 ntBASIC6□□□□□ -1.45
SOX1O00570 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6□□□□□ -1.45
SOX1O00570 AC105399.1-202ENST00000447303 205 ntBASIC6□□□□□ -1.45
SOX1O00570 RPS15AP1-201ENST00000457423 391 ntBASIC6□□□□□ -1.45
SOX1O00570 AL035690.1-201ENST00000490892 383 ntBASIC6□□□□□ -1.45
SOX1O00570 RPL21P129-201ENST00000491732 478 ntBASIC6□□□□□ -1.45
SOX1O00570 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6□□□□□ -1.45
SOX1O00570 TMEM251P1-201ENST00000503717 318 ntBASIC6□□□□□ -1.45
SOX1O00570 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms