Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC073063.1-201ENST00000434352 607 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 RRM2P4-201ENST00000441721 562 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 PPIAP3-201ENST00000450588 505 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 RPL9P32-201ENST00000464118 620 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SDCBPO00560 PHBP14-201ENST00000512887 367 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.84□□□□□ -1.95
SDCBPO00560 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC103843.2-201ENST00000530523 682 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC025260.1-201ENST00000548858 430 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.84□□□□□ -1.95
SDCBPO00560 AL020997.2-201ENST00000602607 184 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AL354950.1-201ENST00000614150 568 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AL356863.1-201ENST00000623378 1080 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 ZNF542P-204ENST00000482727 1305 ntBASIC2.84□□□□□ -1.96
SDCBPO00560 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SDCBPO00560 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SDCBPO00560 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SDCBPO00560 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.84□□□□□ -1.96
SDCBPO00560 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SDCBPO00560 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDCBPO00560 AL645937.1-201ENST00000641739 1652 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AL365440.1-201ENST00000436135 2167 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SDCBPO00560 MIR148B-201ENST00000362252 99 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 RNA5SP124-201ENST00000362739 110 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 RSL24D1P1-201ENST00000404972 493 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 RNA5SP44-201ENST00000410446 133 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AC069218.2-201ENST00000411665 344 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.83□□□□□ -1.96
SDCBPO00560 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 CYCSP4-201ENST00000429682 331 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 ETF1P3-201ENST00000430422 1160 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 RPL23AP22-201ENST00000437556 453 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 U3.44-201ENST00000458938 192 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 RPL23AP62-201ENST00000463396 453 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.83□□□□□ -1.96
SDCBPO00560 AC005726.1-201ENST00000494679 427 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AP001086.1-201ENST00000494882 321 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.83□□□□□ -1.96
SDCBPO00560 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.83□□□□□ -1.96
SDCBPO00560 TRAV31-201ENST00000502780 342 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.83□□□□□ -1.96
SDCBPO00560 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.83□□□□□ -1.96
SDCBPO00560 PAICSP4-201ENST00000517543 1253 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AC068657.1-201ENST00000520807 306 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.83□□□□□ -1.96
SDCBPO00560 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.83□□□□□ -1.96
SDCBPO00560 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.83□□□□□ -1.96
SDCBPO00560 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.83□□□□□ -1.96
SDCBPO00560 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.83□□□□□ -1.96
SDCBPO00560 AL034408.1-202ENST00000636088 415 ntBASIC2.83□□□□□ -1.96
SDCBPO00560 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.83□□□□□ -1.96
SDCBPO00560 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SDCBPO00560 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
SDCBPO00560 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDCBPO00560 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.82□□□□□ -1.96
SDCBPO00560 RNA5SP197-201ENST00000363357 119 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDCBPO00560 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SDCBPO00560 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 PTMAP5-201ENST00000393073 333 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SDCBPO00560 AC006960.1-201ENST00000419980 153 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 NPM1P24-201ENST00000428039 894 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 B3GNT2P1-201ENST00000434960 952 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 RAB28P3-201ENST00000448325 597 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 OR6C72P-201ENST00000451403 892 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC106707.2-201ENST00000484182 374 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.82□□□□□ -1.96
SDCBPO00560 RN7SKP13-201ENST00000515933 244 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 TRMT10BP1-201ENST00000519377 943 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 BNIP3P5-201ENST00000562290 498 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.82□□□□□ -1.96
SDCBPO00560 AC093227.2-201ENST00000589357 285 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC011816.2-201ENST00000607089 556 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.82□□□□□ -1.96
SDCBPO00560 CR392039.5-201ENST00000623201 510 ntBASIC2.82□□□□□ -1.96
SDCBPO00560 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDCBPO00560 AC009950.2-201ENST00000636548 183 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms