Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC011611.5-201ENST00000552477 578 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 PSMB7P1-201ENST00000556349 514 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC090312.2-201ENST00000582687 378 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 NTAN1P1-201ENST00000603150 646 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC005962.2-201ENST00000611427 652 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC090246.1-201ENST00000616499 426 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC022031.1-201ENST00000585985 2593 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM1O00151 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDLIM1O00151 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PDLIM1O00151 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM1O00151 RNU6-1339P-201ENST00000363574 91 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 RNU1-132P-201ENST00000364300 164 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 RNA5SP366-201ENST00000365454 123 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 SNORA62-201ENST00000365493 153 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 RNU6-354P-201ENST00000383862 107 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 RNU6-610P-201ENST00000384264 107 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC011933.1-201ENST00000413334 321 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC004022.2-201ENST00000413824 193 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 P2RY10P2-201ENST00000416730 913 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AL157831.1-201ENST00000426134 473 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM1O00151 RPS3AP54-201ENST00000435535 734 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AL512326.1-201ENST00000443050 721 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.81□□□□□ -1.8
PDLIM1O00151 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM1O00151 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC116533.1-201ENST00000459748 321 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC041039.1-201ENST00000485656 536 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC091167.1-201ENST00000492017 396 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 NAMPTP2-201ENST00000505629 1115 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 PCBP2P3-201ENST00000509726 843 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 RNU5A-7P-201ENST00000515979 116 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM1O00151 HMGB1P1-201ENST00000522557 636 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC139103.1-201ENST00000534696 1030 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC095057.3-201ENST00000567102 1157 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 TMF1P1-201ENST00000576058 373 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 MIR3138-201ENST00000585238 82 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 AC007687.1-201ENST00000602704 304 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC016542.1-201ENST00000608259 493 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC253576.2-201ENST00000618815 580 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.81□□□□□ -1.8
PDLIM1O00151 MIR6758-201ENST00000620653 63 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC068880.4-201ENST00000623082 495 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AP003400.6-201ENST00000624698 740 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC017104.5-201ENST00000637647 639 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 AC119744.1-201ENST00000454746 1715 ntBASIC3.81□□□□□ -1.8
PDLIM1O00151 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
PDLIM1O00151 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDLIM1O00151 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC005183.1-201ENST00000603687 1979 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PDLIM1O00151 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM1O00151 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 RNU2-6P-201ENST00000411404 190 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC069282.1-201ENST00000411911 526 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 C4BPAP2-201ENST00000428434 478 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 UBE2V1P5-201ENST00000440070 405 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AL096829.2-201ENST00000446582 742 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 GXYLT1P1-201ENST00000446657 490 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 DNAJC19P8-201ENST00000452887 259 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC009963.2-201ENST00000453431 138 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 RN7SL860P-201ENST00000473738 223 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC092451.1-201ENST00000480211 153 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM1O00151 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms