Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AL133457.1-201ENST00000564251 987 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RN7SL339P-201ENST00000580597 296 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 MIR548Y-201ENST00000582739 110 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC110792.4-201ENST00000609843 298 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC055764.2-201ENST00000610089 670 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 MIR486-1-201ENST00000612171 68 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AL445493.3-201ENST00000619568 477 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC097372.4-201ENST00000625025 466 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC006504.1-201ENST00000562493 3666 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RAD1P1-201ENST00000231383 813 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNU4-35P-201ENST00000362588 141 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 Y_RNA.110-201ENST00000363220 99 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNU6-984P-201ENST00000363236 109 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNA5SP387-201ENST00000364226 106 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 MIR92A2-201ENST00000385299 75 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNA5SP498-201ENST00000411342 120 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AL158825.1-201ENST00000414735 521 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 MTCO3P4-201ENST00000419236 787 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC073069.1-201ENST00000428657 441 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC074367.1-201ENST00000438685 1125 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC069540.1-201ENST00000446320 988 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AL162388.1-201ENST00000450912 352 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 NPM1P17-201ENST00000479221 602 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 WBP1LP4-201ENST00000505043 344 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC074250.1-201ENST00000511117 192 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 MIR5186-201ENST00000577504 120 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC005776.1-201ENST00000603164 290 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC115621.1-201ENST00000604653 858 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC007179.3-201ENST00000604976 235 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AC243654.2-201ENST00000612843 443 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 AL355365.1-201ENST00000616480 294 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00901.1-201ENST00000617252 152 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 Z73965.1-201ENST00000623412 2297 ntBASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SMIM28A0A1B0GU29 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AL512283.1-201ENST00000606756 1384 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 RNVU1-14-201ENST00000384770 164 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 RNU2-72P-201ENST00000411175 163 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 MTND4P22-201ENST00000413116 1169 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 MTND4P11-201ENST00000417020 1058 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 SEC63P1-201ENST00000425785 1258 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC023598.1-201ENST00000472521 361 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC005798.1-201ENST00000513715 387 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 VTA1P2-201ENST00000520205 911 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 CIR1P1-201ENST00000524055 1133 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 MIR4716-201ENST00000579628 84 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC009318.3-201ENST00000616916 503 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms