Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AP003476.1-201ENST00000623984 516 ntBASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 MTND4P8-201ENST00000514997 1362 ntBASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA1Q9Y5H4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 NXPH1-205ENST00000602349 1953 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL672167.1-203ENST00000641299 2975 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 Z82217.1-201ENST00000625157 8149 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU5B-4P-201ENST00000363508 111 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC234772.1-201ENST00000377927 937 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 SNORD96B-201ENST00000386148 79 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL17P50-201ENST00000396131 546 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC018644.1-201ENST00000429934 551 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC005002.1-201ENST00000447458 540 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL050341.1-201ENST00000447743 313 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL133547.1-201ENST00000448546 220 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 OR51B8P-201ENST00000449892 769 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL7P15-201ENST00000461190 712 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS27P23-201ENST00000487608 251 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC092045.1-201ENST00000495716 1231 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RNF138P1-201ENST00000502765 546 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 STMN1P2-201ENST00000508435 439 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 KRT19P6-201ENST00000510983 209 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 IGKV2-23-201ENST00000518729 323 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 OR4R3P-201ENST00000525084 838 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 RFPL1S-203ENST00000539579 330 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC010735.1-201ENST00000567305 1026 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 COX6CP4-201ENST00000605798 228 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AP004247.3-201ENST00000608682 624 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC124016.2-201ENST00000610058 665 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC009237.17-201ENST00000618111 748 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC007546.1-201ENST00000619452 559 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AL445363.3-201ENST00000623080 671 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC006065.5-201ENST00000623427 349 ntBASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA1Q9Y5H4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC007685.1-201ENST00000329806 452 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS20P14-201ENST00000412545 360 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC008280.1-201ENST00000418851 412 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC246680.2-201ENST00000422106 389 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 OR51AB1P-201ENST00000429046 620 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS26P30-201ENST00000443431 335 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC019227.1-201ENST00000526902 510 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms