Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 NDUFB9P3-201ENST00000521269 501 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 MIR4738-201ENST00000579134 87 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RN7SKP247-201ENST00000411094 308 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 BX890604.2-201ENST00000427883 474 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC006028.1-201ENST00000438379 402 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC087312.1-201ENST00000471411 480 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC021205.2-201ENST00000480069 347 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC004924.1-201ENST00000480160 781 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC118465.1-201ENST00000513820 1271 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RNU1-143P-201ENST00000516296 146 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 U1.23-201ENST00000610293 146 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RNU1-68P-201ENST00000615382 146 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 U1.39-201ENST00000621562 146 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 PTP4A1P3-201ENST00000433661 420 ntBASIC4.13□□□□□ -1.75
SCN11AQ9UI33 Z99127.3-201ENST00000448158 395 ntBASIC4.13□□□□□ -1.75
SCN11AQ9UI33 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 BMS1P21-201ENST00000634565 365 ntBASIC4.13□□□□□ -1.75
SCN11AQ9UI33 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 ZNF90P1-201ENST00000480493 1951 ntBASIC4.13□□□□□ -1.75
SCN11AQ9UI33 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.13□□□□□ -1.75
SCN11AQ9UI33 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 HMGB3P18-201ENST00000406327 590 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 EEF1A1P41-201ENST00000414667 207 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL513174.1-201ENST00000423182 629 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 RPL37P4-201ENST00000448908 268 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AC015917.1-201ENST00000579654 510 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL022311.1-201ENST00000623726 19416 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL024507.1-201ENST00000412741 274 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AC015849.2-201ENST00000605738 409 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 AL451049.1-201ENST00000608672 497 ntBASIC4.12□□□□□ -1.75
SCN11AQ9UI33 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN11AQ9UI33 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 TTC39DP-201ENST00000416781 1688 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 MTCO1P24-201ENST00000515438 1558 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 AC005332.5-201ENST00000591222 2919 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 GCNT6-201ENST00000379591 934 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 RPL35AP12-201ENST00000425362 338 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 AC107083.1-201ENST00000439643 279 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
SCN11AQ9UI33 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN11AQ9UI33 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC062016.1-201ENST00000355719 319 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AP002088.1-201ENST00000382740 395 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 RPS12P18-201ENST00000442381 270 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 MRPS31P2-201ENST00000451581 518 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 RPL12P26-201ENST00000452430 487 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 RPS4XP13-201ENST00000483219 789 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC010374.2-201ENST00000512933 535 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms