Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC008562.1-201ENST00000521763 330 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC106734.1-201ENST00000568646 663 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC005972.3-201ENST00000606304 481 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL354760.1-201ENST00000608357 643 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 RMST_10.1-201ENST00000616309 154 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AL163051.2-201ENST00000618976 735 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 MIR4727-201ENST00000622232 55 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC024595.1-201ENST00000623088 387 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC100871.1-201ENST00000507871 1456 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 AC024560.2-201ENST00000507981 1497 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.39□□□□□ -1.87
CLCF1Q9UBD9 SEC63P2-201ENST00000503863 1939 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 IPO8P1-201ENST00000455509 3109 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 MIR670-201ENST00000390142 98 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 ATP5F1P6-201ENST00000402768 767 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 ZNF603P-201ENST00000405613 487 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 MIR1183-201ENST00000408856 89 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RNU2-65P-201ENST00000410162 185 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RNU2-6P-201ENST00000411404 190 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC019070.1-201ENST00000415008 1024 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC093698.1-201ENST00000423843 571 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 GOT2P5-201ENST00000433995 546 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC096638.2-201ENST00000434965 711 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 YWHAQP9-201ENST00000445891 512 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC068135.1-201ENST00000446164 246 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RPL7P31-201ENST00000450192 724 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RPL7P55-201ENST00000450522 746 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AL035407.2-201ENST00000454090 378 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 FTH1P24-201ENST00000503502 462 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RNA5SP143-201ENST00000516936 115 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 RFPL1S-203ENST00000539579 330 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 ABI1P1-201ENST00000603375 1120 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 MFSD8-213ENST00000641134 1327 ntBASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCF1Q9UBD9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC095050.2-201ENST00000510748 1458 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RNU6-543P-201ENST00000362576 108 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RNU1-87P-201ENST00000363727 170 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms