Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PTGES3P3-201ENST00000511479 482 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC098976.1-201ENST00000513014 541 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 RNA5SP216-201ENST00000516111 123 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 RNU4-60P-201ENST00000517239 135 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 RAB9BP1-201ENST00000519581 626 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 OR7K1P-201ENST00000546439 926 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC090888.1-201ENST00000561335 1141 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 TVP23CP2-201ENST00000571473 623 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC022884.2-201ENST00000578535 580 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 MAGOH2P-202ENST00000584384 429 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC073091.2-201ENST00000603205 907 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC004223.4-201ENST00000612426 332 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC006065.5-201ENST00000623427 349 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 A2MP1-204ENST00000566278 4130 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 NUP58P1-201ENST00000502546 1738 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC087190.4-201ENST00000574616 8334 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 SDAD1P1-202ENST00000524156 2051 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 RNU6-1279P-201ENST00000383917 103 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 MIR192-201ENST00000384915 110 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 RPL31P1-201ENST00000398116 372 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC012065.2-201ENST00000421295 375 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 OR2AH1P-201ENST00000425717 928 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 RPS27AP12-201ENST00000429552 465 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 BMS1P19-201ENST00000433925 393 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 CKS1BP5-201ENST00000434172 273 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 GSTA7P-201ENST00000438425 448 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 H2AFZP5-201ENST00000446960 382 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 RN7SL459P-201ENST00000481078 302 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 IGLV2-34-201ENST00000490007 283 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 RN7SL441P-201ENST00000492388 296 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC012339.2-201ENST00000523996 453 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC239860.2-201ENST00000525886 270 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC109446.2-201ENST00000567872 497 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC008088.1-201ENST00000580993 280 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 MIR3667-201ENST00000581025 74 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 MIR4737-201ENST00000583979 81 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC083899.3-201ENST00000603413 594 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC010680.3-201ENST00000604215 520 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC024560.3-201ENST00000608482 349 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC072039.2-201ENST00000608883 439 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC073968.1-201ENST00000618594 637 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC004777.1-201ENST00000624317 287 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC079228.1-201ENST00000624774 1049 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC007671.2-201ENST00000637344 619 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 OR8B1P-202ENST00000641132 1178 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 AC083843.3-201ENST00000623679 2186 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms