Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PRSS3P4-201ENST00000453323 162 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 FABP5P12-201ENST00000515543 389 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AP001636.2-201ENST00000525517 696 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 UBE2NP1-201ENST00000545592 458 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC069200.1-201ENST00000609511 323 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 AP003072.5-201ENST00000623872 773 ntBASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CISHQ9NSE2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.51□□□□□ -1.85
CISHQ9NSE2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CISHQ9NSE2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CISHQ9NSE2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CISHQ9NSE2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CISHQ9NSE2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CISHQ9NSE2 MIR3074-201ENST00000384885 81 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 RNA5SP229-201ENST00000410809 99 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC244033.1-201ENST00000426826 870 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC005300.1-201ENST00000428401 373 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 HMGB3P11-201ENST00000440127 604 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC087312.1-201ENST00000471411 480 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 CYCSP20-201ENST00000473154 315 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AP000926.1-201ENST00000479573 241 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 RNU6-347P-201ENST00000516658 105 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 NPM1P35-201ENST00000533043 868 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 RPL21P12-201ENST00000559810 515 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 MIR4716-201ENST00000579628 84 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC025946.2-201ENST00000603398 234 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC073657.2-201ENST00000605661 303 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AL354976.1-201ENST00000613843 387 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC009464.1-201ENST00000615731 469 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC084757.4-201ENST00000616350 526 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 U7.8-201ENST00000619968 63 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC244100.1-202ENST00000621554 382 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.5□□□□□ -1.85
CISHQ9NSE2 AC110792.3-201ENST00000595906 1614 ntBASIC3.5□□□□□ -1.85
CISHQ9NSE2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CISHQ9NSE2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 AC063979.1-201ENST00000415539 377 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 GLRXP1-201ENST00000423261 334 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 CST9LP2-201ENST00000437612 320 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 CKS1BP3-201ENST00000600888 237 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 AL161912.3-201ENST00000605404 628 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 AC016252.1-201ENST00000609721 474 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 AL157817.1-201ENST00000614264 790 ntBASIC3.49□□□□□ -1.85
CISHQ9NSE2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CISHQ9NSE2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CISHQ9NSE2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.49□□□□□ -1.85
CISHQ9NSE2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CISHQ9NSE2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 RNU1-75P-201ENST00000347264 129 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 RNA5SP72-201ENST00000364442 117 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 RNA5SP267-201ENST00000364893 126 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 RNVU1-14-201ENST00000384770 164 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms