Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 SNORD35B-201ENST00000363660 87 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RNU6-609P-201ENST00000365459 107 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 MIR449B-201ENST00000384995 97 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RN7SKP156-201ENST00000410308 342 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC069157.1-201ENST00000421749 137 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ELOCP6-201ENST00000429066 328 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RPL6P5-201ENST00000445678 828 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 YWHAQP9-201ENST00000445891 512 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 FABP3P2-201ENST00000453169 399 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ELOCP12-201ENST00000458706 328 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RPL30P11-201ENST00000495304 339 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC068305.1-201ENST00000497406 726 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 MTND1P6-201ENST00000523621 946 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 YPEL5P3-201ENST00000547227 352 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC091516.1-201ENST00000549191 703 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC027104.1-201ENST00000563702 681 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC005776.1-201ENST00000603164 290 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 RPL21P136-201ENST00000605378 396 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AC008432.1-201ENST00000615912 1320 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 MAPK10-253ENST00000641010 4072 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 OR4A15-201ENST00000314706 1035 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 MIR16-2-201ENST00000362117 81 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RNA5SP27-201ENST00000363839 119 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 U8.11-201ENST00000384699 133 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 U8.12-201ENST00000384701 133 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RNA5SP306-201ENST00000411087 107 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RPS3AP25-201ENST00000411660 793 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC092647.1-201ENST00000420654 287 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AL606495.1-201ENST00000422100 813 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 MTND2P11-201ENST00000423638 648 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC068135.1-201ENST00000446164 246 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 NANOGP10-201ENST00000453325 895 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 TVP23BP2-201ENST00000455082 615 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 U8.18-201ENST00000459285 133 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 CYCSP20-201ENST00000473154 315 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AP001086.1-201ENST00000494882 321 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC023141.12-201ENST00000512399 199 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC093853.1-201ENST00000515689 483 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 COX6B1P6-201ENST00000522347 255 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC012417.1-201ENST00000582307 1039 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC015726.1-201ENST00000602353 681 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC008739.3-201ENST00000603262 127 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AL451044.1-201ENST00000604867 238 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC091167.4-201ENST00000605079 184 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AP003117.2-201ENST00000606010 545 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC012603.1-201ENST00000606424 528 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 STMN1P1-201ENST00000617809 440 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AC138907.10-201ENST00000623708 983 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AP005264.7-201ENST00000625003 745 ntBASIC4.11□□□□□ -1.75
HPS4Q9NQG7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HPS4Q9NQG7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms