Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL139089.1-201ENST00000620372 975 ntBASIC4.02□□□□□ -1.77
DDX47Q9H0S4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 AC010608.2-201ENST00000624830 470 ntBASIC4.02□□□□□ -1.77
DDX47Q9H0S4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 AC107081.3-201ENST00000612715 2034 ntBASIC4.02□□□□□ -1.77
DDX47Q9H0S4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX47Q9H0S4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RNA5SP239-201ENST00000410218 129 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 PAICSP7-201ENST00000419829 962 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RPL23AP38-201ENST00000423801 469 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL356276.2-201ENST00000435919 558 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RAB11AP1-201ENST00000442978 646 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 GXYLT1P1-201ENST00000446657 490 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 BX276092.4-201ENST00000452056 248 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AP000926.1-201ENST00000479573 241 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RNA5SP208-201ENST00000516156 78 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RNU6-467P-201ENST00000517027 110 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC034205.1-201ENST00000520621 638 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC007424.1-203ENST00000554613 687 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 RN7SL600P-201ENST00000581811 299 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC005255.1-201ENST00000593748 216 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 MIR8059-201ENST00000620427 81 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC006065.5-201ENST00000623427 349 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 OR6C71P-202ENST00000641886 1107 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 AC073055.1-201ENST00000456901 1621 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 ZNF849P-201ENST00000594711 1566 ntBASIC4.01□□□□□ -1.77
DDX47Q9H0S4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX47Q9H0S4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 AP002001.2-201ENST00000529025 1469 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 RNU6-354P-201ENST00000383862 107 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RNU6-610P-201ENST00000384264 107 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RNU6-1151P-201ENST00000384684 107 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 MIR141-201ENST00000384975 95 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RPL22P22-201ENST00000395439 379 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 MTATP6P19-201ENST00000413797 659 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RPL18P10-201ENST00000425606 538 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 DEFB130D-201ENST00000426866 237 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AL096829.2-201ENST00000446582 742 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AC009220.1-201ENST00000451614 275 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4□□□□□ -1.77
DDX47Q9H0S4 RPL21P71-201ENST00000465598 459 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 UQCRHP4-201ENST00000471686 272 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 AC016065.2-201ENST00000514530 444 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 PRELID3BP4-201ENST00000515476 571 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RNU6-202P-201ENST00000515998 96 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 RNU6-416P-201ENST00000516265 103 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
DDX47Q9H0S4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX47Q9H0S4 OR4A12P-201ENST00000530847 918 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4□□□□□ -1.77
DDX47Q9H0S4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4□□□□□ -1.77
DDX47Q9H0S4 EIF5A2P1-201ENST00000564027 460 ntBASIC4□□□□□ -1.77
DDX47Q9H0S4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms