Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC095050.2-201ENST00000510748 1458 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 Y_RNA.465-201ENST00000384293 102 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL031577.2-201ENST00000404133 280 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 HMGB3P31-201ENST00000413333 595 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 RPS23P10-201ENST00000416185 486 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC022022.1-201ENST00000430304 178 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 MOB1AP1-201ENST00000430903 535 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL035458.1-201ENST00000433096 585 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL354941.1-201ENST00000438600 464 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC023512.1-201ENST00000444513 499 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 RNA5SP519-201ENST00000516480 119 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC095057.3-201ENST00000567102 1157 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 ISCA1P3-201ENST00000577104 373 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL136363.2-201ENST00000604173 851 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AL139286.2-201ENST00000606838 396 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC019131.2-201ENST00000609071 870 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC107075.1-201ENST00000613695 314 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC090246.1-201ENST00000616499 426 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC139769.3-201ENST00000618383 175 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 U6.42-201ENST00000618440 107 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AL161909.1-201ENST00000397390 712 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RNA5SP36-201ENST00000410197 133 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RNU4-25P-201ENST00000410569 230 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RBMY1KP-201ENST00000423480 476 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 MTCYBP34-201ENST00000439552 670 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AL929288.2-201ENST00000446368 407 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 RPS20P4-201ENST00000461659 355 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 LTV1P1-201ENST00000510683 1237 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 EIF1P4-201ENST00000572664 335 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC006272.2-201ENST00000594725 163 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC018618.2-201ENST00000604770 446 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC096553.1-201ENST00000605169 829 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC068944.2-201ENST00000610373 403 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC004223.4-201ENST00000612426 332 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 MIR7151-201ENST00000617477 60 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 FRG1HP-204ENST00000617940 757 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC073569.3-201ENST00000619055 682 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AL596275.2-204ENST00000641628 552 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AL596275.2-206ENST00000641957 626 ntBASIC5.2□□□□□ -1.58
SALL3Q9BXA9 AC027514.1-201ENST00000588561 1603 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms