Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC025470.1-201ENST00000510053 2032 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 MFSD8-219ENST00000641228 2559 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 NACAP2-201ENST00000318548 624 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RNA5SP242-201ENST00000364171 118 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RPS20P2-201ENST00000402520 389 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RN7SKP293-201ENST00000411389 296 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 MTCYBP8-201ENST00000422855 651 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 CHEK2P5-201ENST00000423877 246 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 SUMO2P3-201ENST00000438311 288 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 BNIP3P2-201ENST00000441221 577 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC016691.1-201ENST00000441321 413 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 OR7E116P-201ENST00000448529 957 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 FRG2FP-204ENST00000453982 852 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AL590639.1-201ENST00000456484 337 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 MRPS17P3-201ENST00000465453 385 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RPS23P6-201ENST00000466136 431 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RPL32P33-201ENST00000487023 394 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC021146.2-201ENST00000504736 556 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC017037.1-201ENST00000508460 471 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC021678.3-201ENST00000517893 476 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 IGKV2D-10-201ENST00000520194 281 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 HIGD1AP6-201ENST00000521833 279 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC107953.1-201ENST00000522216 297 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 OR5B19P-201ENST00000531766 928 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC027544.3-201ENST00000535082 757 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC022404.1-201ENST00000555320 273 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RN7SL753P-201ENST00000581238 290 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 SNRPGP17-201ENST00000603780 214 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 RNA5SP440-201ENST00000612665 119 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC093671.1-201ENST00000624981 2929 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC090017.1-201ENST00000548612 1779 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC007823.1-201ENST00000569932 1566 ntBASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSBP3Q9BWW4 AC138907.8-201ENST00000623981 2256 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MIR369-201ENST00000362155 70 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 SNORA64.1-201ENST00000362600 132 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RNU6-1120P-201ENST00000362988 108 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RNU6-777P-201ENST00000364265 104 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.259-201ENST00000364619 101 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 SNORD42.2-201ENST00000365570 69 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.401-201ENST00000383965 117 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RNU6-43P-201ENST00000384302 107 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RNU6-196P-201ENST00000384315 107 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RN7SKP17-201ENST00000411242 351 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms