Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC111000.3-201ENST00000508057 576 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC112206.4-201ENST00000515142 405 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 HMGB1P1-201ENST00000522557 636 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AP000916.1-201ENST00000533869 835 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC092451.2-201ENST00000538746 658 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 SYF2P1-201ENST00000550658 413 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC011468.4-201ENST00000603942 409 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC008745.1-201ENST00000604064 271 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 AC012409.3-201ENST00000611343 981 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 MIR7702-201ENST00000621931 59 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRDL1Q9BU40 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 Y_RNA.493-201ENST00000384422 102 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RNA5SP332-201ENST00000391063 115 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC097374.1-203ENST00000400783 485 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC245028.1-201ENST00000423259 256 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 UBE2D3P3-201ENST00000426992 425 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RPL23AP1-201ENST00000428990 471 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 H2AFZP6-201ENST00000444403 394 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC005002.1-201ENST00000447458 540 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL034418.1-201ENST00000448675 860 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 DHFRP3-201ENST00000455595 559 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RPL35AP15-201ENST00000468042 339 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 MTCO3P35-201ENST00000485582 781 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 MTCO2P9-201ENST00000503214 694 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RNU6-334P-201ENST00000517072 102 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RN7SKP92-201ENST00000517266 244 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 IGLVIV-65-201ENST00000517313 360 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 IGKV2D-19-201ENST00000523346 262 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC005412.1-201ENST00000580812 1049 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 RPL12P25-202ENST00000598100 674 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC234771.5-201ENST00000600161 514 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC079587.1-201ENST00000603846 277 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL513477.2-201ENST00000607858 568 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AC013468.1-201ENST00000608680 598 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AP004247.3-201ENST00000608682 624 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL590282.1-201ENST00000610379 1136 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 AL138960.2-201ENST00000625145 535 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 FP325313.1-201ENST00000638228 703 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 OR56B2P-202ENST00000641377 2453 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 MTND5P31-201ENST00000419366 1374 ntBASIC3.38□□□□□ -1.87
CHRDL1Q9BU40 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 MIR16-2-201ENST00000362117 81 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms