Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 RNU6-1257P-201ENST00000384625 110 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 RNU6-77P-201ENST00000410554 91 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 RNA5SP306-201ENST00000411087 107 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC092638.1-201ENST00000411966 1275 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 JKAMPP1-201ENST00000413804 919 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 TAF13P2-201ENST00000416876 286 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 NUTF2P7-201ENST00000453086 375 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC087385.1-201ENST00000475062 312 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC069306.1-201ENST00000507006 843 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 SNORA70.14-201ENST00000516205 110 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC091516.1-201ENST00000549191 703 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 YWHAZP1-201ENST00000556286 722 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 MIR4512-201ENST00000583257 77 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 VN1R88P-201ENST00000596787 292 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC009948.4-201ENST00000604692 675 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 MIR6868-201ENST00000611215 58 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC233309.1-201ENST00000619522 751 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC013437.2-201ENST00000639587 677 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 AC139713.2-210ENST00000641741 992 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 MTCO1P6-201ENST00000481192 1384 ntBASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2Q9BSQ5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 SNORA51.12-201ENST00000384448 134 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 PRELID3BP11-201ENST00000414230 479 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RPL37P1-201ENST00000432310 284 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RPL21P110-201ENST00000433345 446 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 ARF4P4-201ENST00000439608 520 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AL592437.1-201ENST00000443781 492 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 MTND1P33-201ENST00000446251 917 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 SEPT14P24-201ENST00000447236 180 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 BX248409.1-201ENST00000455497 255 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 CDC42P1-201ENST00000456658 548 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RNU7-140P-201ENST00000459546 60 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC096992.1-201ENST00000459808 709 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RPS26P15-201ENST00000488067 348 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 FTH1P24-201ENST00000503502 462 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RN7SKP21-201ENST00000516503 220 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 RNA5SP309-201ENST00000516670 106 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 OR4A2P-201ENST00000527276 913 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC124293.1-201ENST00000530034 493 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 OR4C2P-201ENST00000530855 1064 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 AP002802.2-201ENST00000605877 235 ntBASIC3.96□□□□□ -1.78
CCM2Q9BSQ5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms