Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC073346.2-201ENST00000624724 2058 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC032011.1-201ENST00000611703 1549 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 RNU5E-10P-201ENST00000363506 118 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 SNORA5A-201ENST00000384111 134 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 RNU6-98P-201ENST00000384173 107 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 MIR491-201ENST00000384877 84 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC096533.1-201ENST00000411645 353 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL160275.2-201ENST00000412010 394 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 PTP4A1P7-201ENST00000423476 514 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC000041.1-201ENST00000439655 175 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC004854.1-201ENST00000440356 349 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 NANOGP10-201ENST00000453325 895 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 GTF2IP9-201ENST00000502460 301 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC008427.1-201ENST00000503102 655 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 PRELID3BP6-201ENST00000503839 571 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC010460.2-201ENST00000509054 677 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 SNORA74D-201ENST00000516404 141 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 DEFB109D-201ENST00000529497 240 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC118942.1-201ENST00000529674 1035 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 RPL21P7-201ENST00000557463 483 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC090751.1-201ENST00000566966 267 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 RN7SL622P-201ENST00000585292 275 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL606834.3-201ENST00000602615 496 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC069431.2-201ENST00000604149 1099 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC034229.4-201ENST00000607861 441 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC027449.1-201ENST00000608890 407 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AL355816.2-201ENST00000610049 647 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 FRG1HP-204ENST00000617940 757 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC243756.2-201ENST00000618406 463 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC084824.4-201ENST00000620106 731 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 FP236240.3-201ENST00000623061 327 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC055839.1-201ENST00000634467 498 ntBASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.23□□□□□ -1.73
NECTIN4Q96NY8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 RNA5SP97-201ENST00000365006 84 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 HNRNPDP2-201ENST00000406475 478 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 SNORA3.3-201ENST00000408712 125 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 RNU6-584P-201ENST00000410350 95 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC114814.2-201ENST00000419195 485 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC004448.2-201ENST00000422360 586 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 MTCYBP32-201ENST00000427945 1084 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AL606517.1-201ENST00000446914 387 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AL096803.2-201ENST00000450032 677 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 GTF2IP12-201ENST00000456547 356 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 snoU109.3-201ENST00000459477 145 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC010469.1-201ENST00000463864 576 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 RPS3AP6-201ENST00000484430 795 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 SNORA70.24-201ENST00000517233 118 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC008562.1-201ENST00000521763 330 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC067852.4-201ENST00000590314 478 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
NECTIN4Q96NY8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms