Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPL10P10-201ENST00000403509 664 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC080125.1-201ENST00000414888 684 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 NENFP1-201ENST00000419476 466 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 HMGB1P9-201ENST00000429856 646 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC107399.1-201ENST00000451226 265 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC112184.1-201ENST00000505179 312 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 HIGD1AP14-201ENST00000507617 282 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC138866.2-201ENST00000508650 584 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 RNU6-138P-201ENST00000515952 107 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC023157.2-201ENST00000540596 141 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 MIR3133-201ENST00000583157 78 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 FAM27E4-201ENST00000605259 342 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.96□□□□□ -1.3
TRIM47Q96LD4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM47Q96LD4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC012254.3-201ENST00000591183 2117 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL442128.2-201ENST00000620246 1824 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RNU6-1188P-201ENST00000363795 107 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RNA5SP394-201ENST00000364216 119 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 SNORA43.1-201ENST00000364863 140 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.350-201ENST00000365409 98 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MIR217-201ENST00000384817 110 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL589647.1-201ENST00000402485 466 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 HMGB1P20-201ENST00000402555 677 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RPL31P52-201ENST00000407532 367 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.625-201ENST00000411256 107 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 BMS1P17-202ENST00000416720 316 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC062016.2-201ENST00000420950 676 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL953862.1-201ENST00000423016 168 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC013470.1-201ENST00000453438 462 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC128716.1-201ENST00000475129 166 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 UBA52P7-201ENST00000486088 380 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RN7SL184P-201ENST00000488308 297 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC067942.3-201ENST00000512025 362 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.682-201ENST00000516457 100 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RN7SKP147-201ENST00000517154 244 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC027229.1-201ENST00000583887 253 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC097468.3-201ENST00000607956 456 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC005899.7-201ENST00000618199 588 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AL137058.3-201ENST00000624531 3099 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AP001541.1-201ENST00000623322 1904 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TRIM47Q96LD4 MTCO1P14-201ENST00000441695 1559 ntBASIC6.95□□□□□ -1.3
TRIM47Q96LD4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms