Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR585-201ENST00000384887 94 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL161909.1-201ENST00000397390 712 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL355615.1-201ENST00000406187 641 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 MTND4P22-201ENST00000413116 1169 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL592293.2-201ENST00000422292 996 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC005517.2-201ENST00000424673 553 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 MTCO1P54-201ENST00000430139 712 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL606517.1-201ENST00000446914 387 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 SEPT14P24-201ENST00000447236 180 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 RPL23AP2-201ENST00000471227 466 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC092045.1-201ENST00000495716 1231 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 GTF2IP9-201ENST00000502460 301 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 TRAV31-201ENST00000502780 342 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC020593.1-201ENST00000507399 299 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC118282.2-201ENST00000508739 374 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 YWHAZP1-201ENST00000556286 722 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC007448.1-201ENST00000582714 234 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC068790.4-201ENST00000602474 263 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC104662.1-201ENST00000604448 511 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 IGHV3-29-201ENST00000604817 344 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC013468.1-201ENST00000608680 598 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 AC090506.2-201ENST00000624521 419 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 MIR3653-201ENST00000625572 110 ntBASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM5Q96HC4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MARK2P15-201ENST00000432204 2186 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RNU6-441P-201ENST00000384545 106 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MIR3074-201ENST00000384885 81 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RPL22P22-201ENST00000395439 379 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AL121972.1-201ENST00000402023 252 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RNA5SP306-201ENST00000411087 107 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RPL37P18-201ENST00000411602 243 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 PGBD4P8-201ENST00000412993 562 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 LIPT1P1-201ENST00000415870 1186 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 Z99714.1-201ENST00000450463 807 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RPL7P1-201ENST00000468161 747 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RPL7P9-201ENST00000468715 747 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC108729.1-201ENST00000487812 947 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MTCO1P30-201ENST00000515244 580 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RNU2-58P-201ENST00000516403 183 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RNU7-143P-201ENST00000516781 65 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC006518.2-201ENST00000542513 940 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 TVP23BP1-201ENST00000557500 617 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AGGF1P6-201ENST00000569213 976 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MTND1P8-201ENST00000571424 950 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 MTCO1P40-201ENST00000574371 625 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC006270.2-201ENST00000578523 652 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms