Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL031985.3-201ENST00000565390 2449 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 FGF7P2-201ENST00000332473 296 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 Y_RNA.359-201ENST00000365498 102 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 DSTNP4-201ENST00000399472 474 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC114755.2-201ENST00000413520 361 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL389915.1-201ENST00000422463 466 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 EIF4HP2-201ENST00000424380 563 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 ZYG11AP1-201ENST00000430329 837 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MTCO2P3-201ENST00000442543 421 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL592447.1-201ENST00000447592 540 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MTND1P27-201ENST00000451117 902 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AURKAPS2-201ENST00000454983 333 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 RPL35AP28-201ENST00000459730 331 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 RPS3AP41-201ENST00000462701 778 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 SRRM1P2-201ENST00000464531 1192 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 FAM172BP-201ENST00000487497 1089 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC114981.1-201ENST00000503897 678 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 ARL2BPP4-201ENST00000506854 471 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 BTF3P13-201ENST00000513224 490 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MTND1P5-201ENST00000517906 940 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 EIF5A2P1-201ENST00000564027 460 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 SNORD39.3-201ENST00000584451 71 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 NF1P5-201ENST00000588287 448 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC083760.1-201ENST00000589621 670 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 Mico1.1-201ENST00000611698 204 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC123768.4-201ENST00000616244 701 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL121890.2-201ENST00000617644 465 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC073968.1-201ENST00000618594 637 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL672167.1-204ENST00000641875 3017 ntBASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CTHRC1Q96CG8 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ZNF652P1-201ENST00000442420 1309 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC103591.2-201ENST00000265259 766 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 OR10J6P-201ENST00000289731 930 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RNU6-433P-201ENST00000363216 104 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RNU6-1215P-201ENST00000384441 102 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms