Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 MIR6853-201ENST00000619642 74 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 AC007494.3-201ENST00000624660 743 ntBASIC5.19□□□□□ -1.58
HPS3Q969F9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HPS3Q969F9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HPS3Q969F9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.19□□□□□ -1.58
HPS3Q969F9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS3Q969F9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 AL359922.3-201ENST00000624779 1670 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS3Q969F9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 MAPK10-320ENST00000641462 6696 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 AL136164.3-201ENST00000624429 3978 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AL590240.1-201ENST00000334118 313 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HPS3Q969F9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.18□□□□□ -1.58
HPS3Q969F9 RNU6-921P-201ENST00000384361 107 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 MIR649-201ENST00000384843 97 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 AL031577.2-201ENST00000404133 280 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL512430.2-201ENST00000406786 339 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL591848.1-201ENST00000413092 322 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 CEACAMP8-201ENST00000413902 580 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL358176.3-201ENST00000420757 454 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC019178.2-201ENST00000423595 505 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 RPL36P19-201ENST00000430744 301 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC098826.1-201ENST00000433943 471 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 RPS20P1-201ENST00000434853 354 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.18□□□□□ -1.58
HPS3Q969F9 CEACAMP9-201ENST00000442990 513 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.18□□□□□ -1.58
HPS3Q969F9 RPS27AP8-201ENST00000452665 445 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 MTCO3P2-201ENST00000457365 171 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 APOOP2-201ENST00000461561 539 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC072039.1-201ENST00000477611 581 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC007686.1-201ENST00000488511 463 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 RN7SL346P-201ENST00000491561 294 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.18□□□□□ -1.58
HPS3Q969F9 SNX5P1-201ENST00000505757 1041 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 RNU6-583P-201ENST00000516012 92 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 RNA5SP360-201ENST00000516555 118 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AP000790.1-201ENST00000528891 737 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.18□□□□□ -1.58
HPS3Q969F9 LSM6P2-201ENST00000552208 177 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.18□□□□□ -1.58
HPS3Q969F9 MTCYBP33-201ENST00000575007 1130 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 RN7SL652P-201ENST00000577769 300 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AC040904.1-201ENST00000590850 223 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AL008729.2-201ENST00000606393 473 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS3Q969F9 AC091953.3-201ENST00000623220 236 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC139792.2-201ENST00000624218 587 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 AC127502.3-201ENST00000636170 1206 ntBASIC5.18□□□□□ -1.58
HPS3Q969F9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HPS3Q969F9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HPS3Q969F9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS3Q969F9 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS3Q969F9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HPS3Q969F9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 SNORD96B-201ENST00000386148 79 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AL021407.1-201ENST00000404531 386 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 AL133384.1-201ENST00000412744 351 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 MORF4L1P6-201ENST00000418771 268 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 AC092427.1-201ENST00000439177 601 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.17□□□□□ -1.58
HPS3Q969F9 RPL26P28-201ENST00000451325 435 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AL445433.1-201ENST00000457507 257 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS3Q969F9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS3Q969F9 DSTNP2-201ENST00000504533 515 ntBASIC5.17□□□□□ -1.58
HPS3Q969F9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.17□□□□□ -1.58
HPS3Q969F9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms