Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 MIR30B-201ENST00000384850 88 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC092832.1-201ENST00000422934 400 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 RPL7P2-201ENST00000427639 268 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 ZNF965P-201ENST00000432501 817 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 CEACAMP4-201ENST00000457676 421 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 RPL23AP62-201ENST00000463396 453 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC068587.1-201ENST00000483613 781 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 FCF1P3-201ENST00000496394 590 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 SCARNA14-201ENST00000516903 136 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 TRAV15-201ENST00000556680 249 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC087499.8-201ENST00000578406 226 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC067852.4-201ENST00000590314 478 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 OR4H6P-202ENST00000603819 340 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC090525.3-201ENST00000605601 189 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC004775.1-201ENST00000607389 753 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC008121.2-201ENST00000614647 523 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AP006248.3-201ENST00000623580 594 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 SAGE2P-201ENST00000420011 2126 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 AC138393.1-206ENST00000540997 1886 ntBASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RTN4IP1Q8WWV3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RNA5SP42-201ENST00000364278 115 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 SNORD115-48-201ENST00000364764 76 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RPL17P36-201ENST00000420302 549 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL591419.1-201ENST00000427423 339 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC074367.1-201ENST00000438685 1125 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RPS29P7-201ENST00000439662 171 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 MRPS31P2-201ENST00000451581 518 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC006539.3-201ENST00000454258 129 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RPS20P21-201ENST00000466859 343 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RPL23AP14-201ENST00000468281 468 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CYCSP20-201ENST00000473154 315 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC012170.1-201ENST00000495139 359 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC025459.1-201ENST00000504072 156 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 RN7SKP141-201ENST00000516167 338 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 IGKV2-23-201ENST00000518729 323 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 NF1P5-201ENST00000588287 448 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 VN1R85P-201ENST00000601587 426 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AP003117.1-201ENST00000602771 554 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AL355816.1-201ENST00000607951 118 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC055764.2-201ENST00000610089 670 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC099669.2-201ENST00000616549 437 ntBASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTN4IP1Q8WWV3 AC068831.8-201ENST00000620171 435 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms