Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP005901.5-201ENST00000545779 1796 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 OR5P1P-201ENST00000299512 925 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RNA5SP332-201ENST00000391063 115 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RPS4XP9-201ENST00000405151 780 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 SNORA11F-201ENST00000408237 128 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RWDD4P2-201ENST00000426392 563 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 MOB1AP1-201ENST00000430903 535 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 PTENP1-201ENST00000447117 1215 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC104689.1-201ENST00000473356 768 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 MTND6P6-201ENST00000478031 263 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC004263.1-201ENST00000479327 332 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC034244.1-201ENST00000507687 207 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC063950.1-201ENST00000552036 308 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC084783.1-201ENST00000565846 910 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC022662.1-201ENST00000580252 331 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AL139286.1-201ENST00000604465 483 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC069545.1-201ENST00000605671 358 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC092106.3-201ENST00000611308 722 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC024257.5-201ENST00000612739 531 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC231759.1-201ENST00000616455 597 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AP000484.1-201ENST00000620067 1252 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AP005019.3-201ENST00000620418 560 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC019226.2-201ENST00000625973 424 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 AL353743.4-201ENST00000422653 1547 ntBASIC4.26□□□□□ -1.73
SLC44A1Q8WWI5 ZNF876P-202ENST00000398732 1485 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 HMGB1P5-201ENST00000255320 642 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 NACA3P-201ENST00000359690 648 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 MIR331-201ENST00000362302 94 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 RNU1-32P-201ENST00000363937 159 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL583835.1-201ENST00000399570 407 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 SFR1P1-201ENST00000403720 688 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL450992.3-201ENST00000413192 568 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 TMSB10P2-201ENST00000416049 131 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 CYP1D1P-201ENST00000416662 1433 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 Z77249.1-201ENST00000444622 1175 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 HMGB3P22-202ENST00000451823 572 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 RPL23AP81-201ENST00000455252 467 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 BOLA3P3-201ENST00000505182 232 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 RAB9BP1-201ENST00000519581 626 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 UBTFL10-201ENST00000528532 562 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AP001317.1-201ENST00000531194 960 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC025811.1-201ENST00000604312 472 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms