Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC234781.2-201ENST00000426370 994 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RPS12P10-201ENST00000427031 377 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RPS27AP12-201ENST00000429552 465 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AL445567.1-201ENST00000439121 144 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RPL23AP93-201ENST00000440847 484 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RNU7-125P-201ENST00000458760 62 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RN7SL303P-201ENST00000469773 251 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC013828.1-201ENST00000481845 158 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 HMGB1P28-201ENST00000507778 552 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 MTND1P22-201ENST00000510572 951 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 SNORA31.9-201ENST00000516429 84 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC005868.1-201ENST00000536421 331 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC068993.1-201ENST00000546724 589 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 FKBP1BP1-201ENST00000553366 325 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 ISCA1P3-201ENST00000577104 373 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 MIR4512-201ENST00000583257 77 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 MIR3138-201ENST00000585238 82 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC112220.3-201ENST00000605502 502 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 HSPE1P14-201ENST00000605812 302 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 BNIP3P41-202ENST00000616656 861 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 OR8B1P-202ENST00000641132 1178 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 AC117529.2-201ENST00000512159 2068 ntBASIC4.64□□□□□ -1.67
HMGB4Q8WW32 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGB4Q8WW32 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 RNA5SP515-201ENST00000364570 118 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 RN7SKP27-201ENST00000410684 333 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC011933.1-201ENST00000413334 321 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 UBE2V1P1-201ENST00000430836 445 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 MTND2P20-201ENST00000440805 661 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 PTMAP3-201ENST00000447474 330 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 NUTF2P3-201ENST00000448540 384 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SLC31A1P1-201ENST00000451221 567 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AL122001.1-201ENST00000457027 370 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 snoU13.7-201ENST00000459220 104 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SCARNA10-201ENST00000459255 330 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC116533.1-201ENST00000459748 321 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC112206.1-201ENST00000468416 477 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC069304.1-201ENST00000491593 704 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC073073.1-201ENST00000493920 463 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 RPF2P2-201ENST00000504693 896 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 MTATP6P22-201ENST00000507369 598 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC090071.1-201ENST00000507713 644 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC093824.1-201ENST00000508796 343 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC105313.1-201ENST00000509121 353 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 HSPE1P23-201ENST00000509838 286 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC110792.2-201ENST00000510278 224 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 RNY4P37-201ENST00000516225 96 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 OR5AK1P-201ENST00000524837 922 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC090502.2-201ENST00000549267 280 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC125611.1-201ENST00000549563 229 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AL389895.1-201ENST00000554127 252 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SULT1C2P1-202ENST00000562418 459 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC007224.1-201ENST00000564410 144 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC135628.1-201ENST00000568867 534 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC090616.2-202ENST00000584248 222 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC107982.3-201ENST00000584957 985 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 IPO5P1-202ENST00000600039 287 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC006539.2-201ENST00000601729 572 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AP001521.1-201ENST00000609150 300 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC245297.2-201ENST00000610119 565 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC026422.1-201ENST00000623961 452 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC004943.3-201ENST00000624116 600 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms