Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL161734.1-201ENST00000609720 557 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC090617.10-201ENST00000624308 134 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC079776.5-201ENST00000641920 211 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 AC005224.3-201ENST00000584683 2140 ntBASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 MTND4P35-201ENST00000604257 1375 ntBASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SHKBP1Q8TBC3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 OR11H4-201ENST00000315409 1082 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RNU4-2-201ENST00000365668 141 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 SNORA32.2-201ENST00000384049 122 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 NPM1P40-201ENST00000412758 733 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL590806.1-201ENST00000415818 853 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC114814.2-201ENST00000419195 485 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL645937.1-202ENST00000421799 937 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL158073.1-201ENST00000426848 1104 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RPL21P110-201ENST00000433345 446 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 PTMAP6-201ENST00000439110 327 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RPL17P49-201ENST00000443728 411 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC079080.1-201ENST00000479841 822 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RNA5SP401-201ENST00000515920 127 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 DPPA3P3-201ENST00000603842 430 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC010591.1-201ENST00000603941 649 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL359999.1-201ENST00000604513 294 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 CTHRC1P1-201ENST00000605383 469 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC080078.3-201ENST00000605407 463 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL451049.1-201ENST00000608672 497 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC233309.1-201ENST00000619522 751 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AL161912.4-201ENST00000623889 2468 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ADAM24P-201ENST00000398655 2101 ntBASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SHKBP1Q8TBC3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 RNA5SP183-201ENST00000362452 119 ntBASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-492P-201ENST00000363035 104 ntBASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 Y_RNA.395-201ENST00000383945 109 ntBASIC5.88□□□□□ -1.47
SHKBP1Q8TBC3 RNU6-185P-201ENST00000384421 107 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms