Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RN7SKP283-201ENST00000517197 270 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC087894.1-201ENST00000538359 518 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 CYCSP30-201ENST00000546447 172 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC126365.2-201ENST00000580630 379 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC090312.2-201ENST00000582687 378 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 NF1P5-201ENST00000588287 448 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC244505.7-201ENST00000599675 272 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AP002906.1-201ENST00000603405 233 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC090912.3-201ENST00000609775 533 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AP003476.1-201ENST00000623984 516 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 ASNSP1-201ENST00000518311 1939 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 LINC02471-203ENST00000641941 4752 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 RNU1-64P-201ENST00000365443 163 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 U6.112-201ENST00000384129 70 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 MIR30B-201ENST00000384850 88 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 DNAJC19P6-201ENST00000401853 280 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 CYP4F29P-201ENST00000420685 446 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC246680.2-201ENST00000422106 389 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC087650.1-201ENST00000431445 468 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 KCTD10P1-201ENST00000434203 625 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 SDR42E1P3-201ENST00000438345 502 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AL645931.1-201ENST00000439737 410 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC092809.1-201ENST00000441469 474 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 EXTL2P1-201ENST00000446218 416 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 IPO8P1-201ENST00000455509 3109 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC073055.1-201ENST00000456901 1621 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 FTH1P2-201ENST00000466086 412 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 HMGB1P1-201ENST00000522557 636 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AP003066.2-201ENST00000529375 555 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC139103.1-201ENST00000534696 1030 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 MIR4716-201ENST00000579628 84 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC099669.2-201ENST00000616549 437 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC010872.1-201ENST00000624225 675 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 AC017104.5-201ENST00000637647 639 ntBASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
C9orf40Q8IXQ3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC119744.1-201ENST00000454746 1715 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AP001486.2-201ENST00000561652 5113 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 MTND4P10-201ENST00000446199 1363 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 OR11H5P-202ENST00000641612 1325 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 MIR525-201ENST00000384978 85 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 RNU6-932P-201ENST00000391108 106 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 ZNF602P-201ENST00000405929 924 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC114814.2-201ENST00000419195 485 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC092647.1-201ENST00000420654 287 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AC093698.1-201ENST00000423843 571 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf40Q8IXQ3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms