Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC006042.3-201ENST00000454684 1469 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 HSPE1P26-201ENST00000405341 275 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC007991.1-201ENST00000522680 631 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 OR4V1P-201ENST00000525394 1140 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC107982.3-201ENST00000584957 985 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 BNIP3P38-201ENST00000601117 544 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AC069209.1-201ENST00000619282 651 ntBASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDKL3Q8IVW4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC068647.1-201ENST00000489539 2265 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 MTCO1P8-201ENST00000416914 1523 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AL592494.2-201ENST00000425455 1548 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 DHFRP5-201ENST00000406944 564 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC069218.2-201ENST00000411665 344 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 MTND4P22-201ENST00000413116 1169 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC023598.1-201ENST00000472521 361 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 FTH1P24-201ENST00000503502 462 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 NPM1P41-201ENST00000512920 831 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC022784.5-201ENST00000522241 437 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AP006245.1-201ENST00000522549 120 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 VN1R85P-201ENST00000601587 426 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AL451086.1-201ENST00000605596 223 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC099676.1-201ENST00000608886 657 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 AC024941.1-201ENST00000612250 334 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 ASNSP1-204ENST00000641977 1664 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
CDKL3Q8IVW4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RNU6-819P-201ENST00000364116 107 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RNU6-31P-201ENST00000384388 108 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 MIR153-1-201ENST00000384914 90 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC007066.1-201ENST00000392902 381 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 HMGB1P10-201ENST00000395823 563 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL158071.1-201ENST00000430315 461 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 NDUFA5P10-201ENST00000432147 357 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms