Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPL21P12-201ENST00000559810 515 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AP005119.1-201ENST00000580956 292 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC060771.1-201ENST00000582031 164 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 PSMA6P4-201ENST00000603247 718 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 CTHRC1P1-201ENST00000605383 469 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL513218.1-201ENST00000606527 391 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC006924.1-201ENST00000610750 559 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 HMGB1P24-202ENST00000615653 685 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC004972.1-201ENST00000623934 2209 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AP002370.1-201ENST00000528055 1602 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC012618.3-205ENST00000637896 1496 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RNU5E-8P-201ENST00000363502 116 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RN7SKP44-201ENST00000363602 316 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.234-201ENST00000364409 97 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 U3.20-201ENST00000390909 217 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 OR3A2-201ENST00000408891 1076 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RN7SKP216-201ENST00000411050 312 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 TIMM9P1-201ENST00000436122 256 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AL445665.1-202ENST00000452436 324 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RPS4XP10-201ENST00000465034 731 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 VN1R17P-201ENST00000472048 1090 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RN7SL799P-201ENST00000475891 298 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC012181.1-201ENST00000479895 423 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC068522.1-201ENST00000482895 345 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC091885.1-201ENST00000506658 268 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC022404.1-201ENST00000555320 273 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AL117187.1-201ENST00000555482 181 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC092807.2-201ENST00000609367 243 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 RFPL4AP6-201ENST00000616792 846 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AP005431.1-201ENST00000618479 319 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC118658.2-201ENST00000618697 459 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AL159972.1-201ENST00000625150 448 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC011493.1-201ENST00000596753 1632 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC009313.2-201ENST00000417893 1941 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC011460.1-201ENST00000636268 1834 ntBASIC6.6□□□□□ -1.35
RNF135Q8IUD6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC008627.1-201ENST00000517511 1704 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 RNU6-97P-201ENST00000363387 104 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.301-201ENST00000364990 103 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 RNU4-66P-201ENST00000365199 138 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.373-201ENST00000365600 103 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.395-201ENST00000383945 109 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 RNU6-39P-201ENST00000384344 107 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 MIR454-201ENST00000390180 115 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC009965.2-201ENST00000425328 970 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms