Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AP001052.1-201ENST00000626421 99 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 KPNA2P1-201ENST00000458289 1591 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC011369.2-201ENST00000624423 1567 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC121333.1-201ENST00000567488 2709 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 MTCO1P7-201ENST00000419523 1542 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 SNORA62.1-201ENST00000364287 154 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RN7SKP237-201ENST00000364663 301 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-317P-201ENST00000384031 107 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RNU2-29P-201ENST00000410423 189 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RSL24D1P6-201ENST00000426934 401 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RNU7-182P-201ENST00000459009 62 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RPL12P20-201ENST00000475538 479 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC098583.1-201ENST00000480875 255 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RPL7P6-201ENST00000480903 738 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RPL23AP41-201ENST00000484754 458 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RN7SL362P-201ENST00000494228 267 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.654-201ENST00000497848 106 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC109635.4-202ENST00000531666 412 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 RPL21P12-201ENST00000559810 515 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC138761.3-201ENST00000579993 334 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC008687.2-201ENST00000597865 520 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC011890.2-201ENST00000613393 294 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 MIR6778-201ENST00000617912 73 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AC073592.6-201ENST00000624271 415 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL121950.1-201ENST00000624993 2077 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 AL158163.1-201ENST00000603915 1649 ntBASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LYSMD3Q7Z3D4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 SAMMSON-210ENST00000641260 1308 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.117-201ENST00000363294 101 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.212-201ENST00000364177 102 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.389-201ENST00000383924 113 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.496-201ENST00000384444 101 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 MIR1275-201ENST00000408770 80 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 CYP4F30P-202ENST00000420048 405 ntBASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.31□□□□□ -1.4
LYSMD3Q7Z3D4 AC099782.1-201ENST00000425889 474 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms