Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CYP2C60P-201ENST00000566088 139 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 SNORD39.4-201ENST00000620099 78 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AL512643.1-201ENST00000635735 524 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 AL672167.1-206ENST00000356293 943 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.55□□□□□ -2
VPS13CQ709C8 AL592148.1-201ENST00000413568 445 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 CST9LP2-201ENST00000437612 320 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AC112653.1-201ENST00000443851 386 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 RPL21P6-201ENST00000479171 504 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
VPS13CQ709C8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.55□□□□□ -2
VPS13CQ709C8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.55□□□□□ -2
VPS13CQ709C8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 AL035407.1-201ENST00000429211 571 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
VPS13CQ709C8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.54□□□□□ -2
VPS13CQ709C8 ANXA2P1-201ENST00000505539 926 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.54□□□□□ -2
VPS13CQ709C8 AC009812.2-201ENST00000517657 457 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 AC007566.2-201ENST00000603642 413 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.54□□□□□ -2
VPS13CQ709C8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 AC073069.1-201ENST00000428657 441 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 ARL5AP4-201ENST00000430731 512 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
VPS13CQ709C8 RNA5SP367-201ENST00000516557 118 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
VPS13CQ709C8 AC007318.2-201ENST00000620999 243 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VPS13CQ709C8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 RPS21P8-201ENST00000413365 247 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.54□□□□□ -2
VPS13CQ709C8 AC016696.1-201ENST00000446949 318 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 HSPE1P6-201ENST00000479457 291 ntBASIC2.54□□□□□ -2
VPS13CQ709C8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.54□□□□□ -2
VPS13CQ709C8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS13CQ709C8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 ASNSP1-201ENST00000518311 1939 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 AL136116.1-201ENST00000403591 381 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.53□□□□□ -2
VPS13CQ709C8 RPS26P15-201ENST00000488067 348 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.53□□□□□ -2
VPS13CQ709C8 AP000873.5-201ENST00000533906 236 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC093524.1-201ENST00000564266 1094 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC096947.1-201ENST00000603233 470 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC138965.3-201ENST00000623875 498 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.53□□□□□ -2
VPS13CQ709C8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.53□□□□□ -2
VPS13CQ709C8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.53□□□□□ -2
VPS13CQ709C8 AL445528.1-201ENST00000426330 420 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 AC008565.1-201ENST00000509046 885 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.53□□□□□ -2
VPS13CQ709C8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.53□□□□□ -2
VPS13CQ709C8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 AL157817.1-201ENST00000614264 790 ntBASIC2.53□□□□□ -2
VPS13CQ709C8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.53□□□□□ -2
VPS13CQ709C8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS13CQ709C8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VPS13CQ709C8 AC073325.2-201ENST00000339545 159 ntBASIC2.53□□□□□ -2.01
VPS13CQ709C8 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2.01
VPS13CQ709C8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms