Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AL389895.1-201ENST00000554127 252 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC126915.2-201ENST00000610957 190 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AL049539.1-201ENST00000611964 459 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 OR2L1P-202ENST00000641567 1023 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 EFTUD1P2-201ENST00000514817 1603 ntBASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RC3H1Q5TC82 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 U3.2-201ENST00000362981 210 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RNA5SP335-201ENST00000363817 110 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RNU6-98P-201ENST00000384173 107 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AL583835.1-201ENST00000399570 407 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AL359634.1-202ENST00000404721 284 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RNU2-9P-201ENST00000410194 145 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RNU2-64P-201ENST00000411315 191 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC073264.1-201ENST00000411508 416 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC096775.1-201ENST00000437724 448 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC073415.1-201ENST00000449240 153 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC004129.2-201ENST00000457229 287 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RPS4XP10-201ENST00000465034 731 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 TMEM248P1-201ENST00000510579 951 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC021146.1-201ENST00000511202 716 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC108043.1-201ENST00000512696 574 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 MIR3167-201ENST00000579623 85 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 MIR4646-201ENST00000580775 63 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC073539.2-201ENST00000597113 165 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 RPL26P30-202ENST00000602923 645 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AC137590.2-201ENST00000619709 240 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 OR11H5P-202ENST00000641612 1325 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 AL034546.1-201ENST00000623740 3693 ntBASIC7.22□□□□□ -1.25
RC3H1Q5TC82 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RC3H1Q5TC82 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 AL591848.4-201ENST00000567832 3472 ntBASIC7.21□□□□□ -1.25
RC3H1Q5TC82 LCOR-201ENST00000286067 4542 ntBASIC7.21□□□□□ -1.25
RC3H1Q5TC82 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RC3H1Q5TC82 RPL23P2-201ENST00000320371 421 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.100-201ENST00000363141 102 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 MRPL42P3-201ENST00000401492 326 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AL645733.1-201ENST00000402250 217 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 RPL37P18-201ENST00000411602 243 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AL590806.1-201ENST00000415818 853 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 OR6D1P-201ENST00000436165 939 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 RPS15AP9-201ENST00000439856 381 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 RPL7P59-201ENST00000447700 943 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC079080.1-201ENST00000479841 822 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC104564.1-201ENST00000493028 407 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC027309.2-201ENST00000520566 192 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AL157817.1-201ENST00000614264 790 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms